Publications

Strmečki S., Paleček E. (2018), Adsorption/desorption of biomacromolecules involved in catalytic hydrogen evolution, Bioelectrochemistry

Hudzieczek V, Cegan R, Cermak T, Bacovska N, Machalkova Z, Dolezal K, Plihalova L, Voytas D, Hobza R, Vyskot B (2018), Agrobacterium rhizogenes-mediated transformation of a dioecious plant model Silene latifolia, NEW BIOTECHNOLOGY

Dokládal L, Benková E, Honys D, Dupľáková N, Lee LY, Gelvin SB, Sýkorová E. (2018), An armadillo-domain protein participates in a telomerase interaction network., Plant Mol Biol. 2018;97(4-5):407-420. doi: 10.1007/s11103-018-0747-4.

Dubový P., Hradilová-Svíženská I., Klusáková I., Kokošová V., Brázda V., Joukal M. (2018), Bilateral activation of STAT3 by phosphorylation at the tyrosine-705 (Y705) and serine-727 (S727) positions and its nuclear translocation in primary sensory neurons following unilateral sciatic nerve injury, Histochemistry and Cell Biology

Bartas M., Brazda V., Karlicky V., Cerven J., Petinka P. (2018), Bioinformatics analyses and in vitro evidence for five and six stacked G-quadruplex forming sequences, Biochimie

Havranová-Vidláková P., Špaček J., Vítová L., Hermanová M., Dadová J., Raindlová V., Hocek M., Fojta M., Havran L. (2018), Butylacrylate-nucleobase Conjugates as Targets for Two-step Redox Labeling of DNA with an Osmium Tetroxide Complex, Electroanalysis

Kratochvílová I, Kopečná O, Bačíková A, Pagáčová E, Falková I, Follett SE, Elliott KW, Varga K, Golan M, Falk M. (2018), Changes in Cryopreserved Cell Nuclei Serve as Indicators of Processes during Freezing and Thawing, Langmuir. 2018 Oct 26. doi: 10.1021/acs.langmuir.8b02742.

Ostatná V., Kasalová V., Kmeťová K., Šedo O. (2018), Changes of electrocatalytic response of bovine serum albumin after its methylation and acetylation, Journal of Electroanalytical Chemistry

Hasoň S., Daňhel A., Schwarzová-Pecková K., Fojta M. (2018), Chapter 3 - Carbon Electrodes in Electrochemical Analysis of Biomolecules and Bioactive Substances: Roles of Surface Structures and Chemical Groups, BOOK: Nanotechnology and Biosensors, A volume in Advanced Nanomaterials

Falk M, Falková I, Kopečná O, Bačíková A, Pagáčová E, Šimek D, Golan M, Kozubek S, Pekarová M, Follett SE, Klejdus B, Elliott KW, Varga K, Teplá O, Kratochvílová I. (2018), Chromatin architecture changes and DNA replication fork collapse are critical features in cryopreserved cells that are differentially controlled by cryoprotectants, Scientific Reports (Nature), 2018, 8:14694, DOI:10.1038/s41598-018-32939-5

Brázda V., Lýsek J., Bartas M., Fojta M. (2018), Complex Analyses of Short Inverted Repeats in All Sequenced Chloroplast DNAs, BioMed Research International

Cechova J., Lysek J., Bartas M., Brazda V. (2018), Complex analyses of inverted repeats in mitochondrial genomes revealed their importance and variability, BIOINFORMATICS

Golan M, Pribyl J, Pesl M, Jelinkova S, Acimovic I, Jaros J, Rotrekl V, Falk M, Sefc L, Skladal P, Kratochvilova I. (2018), Cryopreserved Cells Regeneration Monitored by Atomic Force Microscopy and Correlated with State of Cytoskeleton and Nuclear Membrane, IEEE Transactions on Nanobioscience 17(4),8489909, pp. 485-497

Rodríguez Lorenzo JL, Hobza R, Vyskot B (2018), DNA methylation and genetic degeneration of the Y chromosome in the dioecious plant Silene latifolia, BMC GENOMICS

Orazio Angelo Arcidiacono, Jana Krejčí, Jana Suchánková, Eva Bártová (2018), Deacetylation of Histone H4 Accompanying Cardiomyogenesis isWeakened in HDAC1-Depleted ES Cells, Int. J. Mol. Sci.

Bártová E, Legartová S, Krejčí J, Řezníčková P, Kovaříková AS, Suchánková J, Fedr R, Smirnov E, Hornáček M, Raška I. (2018), Depletion of A-type lamins and Lap2α reduces 53BP1 accumulation at UV-induced DNA lesions and Lap2α protein is responsible for compactness of irradiated chromatin., J Cell Biochem

Hermanová M., Orság P., Balintová J., Hocek M., Fojta M. (2018), Dual redox labeling of DNA as a tool for electrochemical detection of p53 protein-DNA interactions, Analytica Chimica Acta

(2018), Effective scheme of photolysis of GFP in live cell as revealed with confocal fluorescence microscopy.,

Glazachev YI, Orlova DY, Řezníčková P, Bártová E. (2018), Effective scheme of photolysis of GFP in live cell as revealed with confocal fluorescence microscopy., Phys Biol

Fojt L, Doneux T., Fojta M. (2018), Effects of halide anions on adsorption and 2D condensation of 5- fluorocytosine at hanging mercury drop electrode, Journal of Electroanalytical Chemistry

Plucnara M., Eksin E., Erdem A., Fojta M. (2018), Electrochemical Detection of SNP in Human Mitochondrial DNA using Cyclic Primer Extension with Biotinylated Nucletides and Enzymatic Labeling at Disposable Pencil Graphite Electrodes, Electroanalysis

Danhel A., Trosanova Z., Balintova J., Simonova A., Pospíšil L., Cvačka J., Hocek M., Fojta M. (2018), Electrochemical reduction of azidophenyl-deoxynucleoside conjugates at mercury surfacee, Electrochimica Acta

Ostatná V., Kasalová V., Sommerová L., Hrstka R. (2018), Electrochemical sensing of interaction of anterior gradient-2 protein with peptides at a charged interface, Electrochimica Acta

Danhel A., Ligmajera F., Sikola T., Walcarius A., Fojta M. (2018), Electrodeposition of silver amalgam particles on ITO – Towards novel electrode material, Journal of Electroanalytical Chemistry

Muller P., Chan J.M., Simoncik O., Fojta M., Lane D.P., Hupp T., Vojtesek B. (2018), Evidence for allosteric effects on p53 oligomerization induced by phosphorylation, Protein Science

Muyle A, Zemp N, Fruchard C, Cegan R, Vrana J, Deschamps C, Tavares R, Hobza R, Picard F, Widmer A, Marais GAB (2018), Genomic imprinting mediates dosage compensation in a young plant XY system, NATURE PLANTS

Alena Svobodová Kovaříková, Soňa Legartová, Jana Krejčí, Eva Bártova (2018), H3K9me3 and H4K20me3 represent the epigenetic landscape for 53BP1 binding to DNA lesions, AGING

Štros M, Kučírek M, Sani SA, Polanská E. (2018), HMGB1-mediated DNA bending: Distinct roles in increasing p53 binding to DNA and the transactivation of p53-responsive gene promoters, Biochim Biophys Acta Gene Regul Mech. 2018;1861(3):200-210. doi: 10.1016/j.bbagrm.2018.02.002.

Hofer M, Hoferová Z, Remšík J, Nováková M, Procházková J, Fedr R, Kohoutek J, Dušek L, Hampl A, Souček K. (2018), Hematological Findings in Non-Treated and γ-Irradiated Mice Deficient for MIC-1/GDF15, Physiol Res. 2018, 16;67(4):623-636.

Hofer M, Hoferová Z, Gruzdev A, Dušek L, Falk M. (2018), Impaired post-irradiation survival of cyclooxygenase-2-deficient mice, Physiol Res. 2018;67(5):809-812.

Paleček E., Bartošík M. (2018), Intrinsic Electrocatalysis in DNA, CHEMELECTROCHEM

Eva Bartova, Gabriela Lochmanova, Sona Legartova, Jana Suchankova, Radek Fedr, Jana Krejcí, Zbynek Zdrahal (2018), Irradiation by g-rays reduces the level of H3S10 phosphorylation and weakens the G2 phase-dependent interaction between H3S10 phosphorylation and gH2AX, Biochimie

Špaček J., Daňhel A., Hasoň S., Fojta M. (2018), Label-free detection of canonical DNA bases, uracil and 5-methylcytosine in DNA oligonucleotides using linear sweep voltammetry at a pyrolytic graphite electrode, Electrochemistry Communications

Bartas M., Cerven J., Oppelt J., Peteja M., Vavra P., Zonca P., Prochazka V., Brazda V., Pecinka P. (2018), Liver regeneration during the associating liver partition and portal vein ligation for staged hepatectomy procedure in Sus scrofa is positively modulated by stem cells, Oncology Letters

Guiblet WM, Cremona MA, Cechova M, Harris RS, Kejnovská I, Kejnovský E, Eckert K, Chiaromonte F, Makova KD (2018), Long-read sequencing technology indicates genome-wide effects of non-B DNA on polymerization speed and error rate, Genome Research, 28, 1767-1778

Trefulka M. (2018), Modification of Biomacromolecules with Six-valent Osmium Complexes and Electrochemical Analysis of the Modified Products, Chemické Listy

Ostatná V., Černocká H., Hasoň S., Paleček E. (2018), Modification of a Mercury Electrode with Different Thioalkanes: Structure-Sensitive Bovine Serum Albumin Analysis, CHEMELECTROCHEM

Kamarytova K, Kudova J, Cechova V, Koreny M, Hoferova Z, Freeman B, Pekarova M. (2018), Nitro-oleic acid regulates differentiation of embryonic stem cells, Free Radical Biology and Medicine, 2018, 128, Suppl 1, S53

Khalo IV, Konokhova AI, Orlova DY, Trusov KV, Yurkin MA, Bartova E, Kozubek S, Maltsev VP, Chernyshev AV. (2018), Nuclear apoptotic volume decrease in individual cells: Confocal microscopy imaging and kinetic modeling., J Theor Biol

Jezkova L, Zadneprianetc M, Kulikova E, Smirnova E, Bulanova T, Depes D, Falkova I, Boreyko A, Krasavin E, Davidkova M, Kozubek S, Valentova O, Falk M. (2018), Particles with similar LET values generate DNA breaks of different complexity and reparability: A high-resolution microscopy analysis of γh2AX/53BP1 foci, Nanoscale 10(3), pp. 1162-1179

Tokan V, Puterova J, Lexa M, Kejnovsky E (2018), Quadruplex DNA in long terminal repeats in maize LTR retrotransposons inhibits the expression of a reporter gene in yeast, BMC GENOMICS

Bobkova E, Depes D, Lee JH, Jezkova L, Falkova I, Pagacova E, Kopecna O, Zadneprianetc M, Bacikova A, Kulikova E, Smirnova E, Bulanova T, Boreyko A, Krasavin E, Wenz F, Bestvater F, Hildenbrand G, Hausmann M, Falk M. (2018), Recruitment of 53BP1 proteins for DNA repair and persistence of repair clusters differ for cell types as detected by single molecule localization microscopy, International Journal of Molecular Sciences 19(12),3713

Dvořáčková M, Raposo B, Matula P, Fuchs J, Schubert V, Peška V, Desvoyes B, Gutierrez C, Fajkus J. (2018), Replication of ribosomal DNA in Arabidopsis occurs both inside and outside the nucleolus during S phase progression, J Cell Sci. 2018;131(2). pii: jcs202416. doi: 10.1242/jcs.202416.

Amodio G, Cichy J, Conde P, Matteoli G, Moreau A, Ochando J, Oral BH, Pekarova M, Ryan EJ, Roth J, Sohrabi Y, Cuturi MC, Gregori S. (2018), Role of myeloid regulatory cells (MRCs) in maintaining tissue homeostasis and promoting tolerance in autoimmunity, inflammatory disease and transplantation, Cancer Immunol Immunother. 2018, doi: 10.1007/s00262-018-2264-3

Hobza R, Hudzieczek V, Kubat Z, Cegan R, Vyskot B, Kejnovsky E, Janousek B (2018), Sex and the flower – developmental aspects of sex chromosome evolution, ANNALS OF BOTANY

Depes, D, Lee, J.-H., Bobkova, Ec, Jezkova, L., Falkova, I., Bestvater, F., Pagacova, E., Kopecna, O., Zadneprianetc, M., Bacikova, A., Kulikova, E., Smirnova, E., Bulanova, T., Boreyko, A., Krasavin, E., Hausmann, M., Falk, M. (2018), Single-molecule localization microscopy as a promising tool for γH2AX/53BP1 foci exploration, European Physical Journal D 72(9),158

Zubal L., Bonani W., Maniglio D., Ceccato R., Renčiuk D., Hampl A., Migliaresi C., Jančář J., Vojtová L. (2018), Soluble collagen dissolution and assembling in pressurized carbon dioxide water solutions., Express Polymer Letters, 12, 159-170

Dorčák V., Novák D., Kabeláč M., Kroutil O., Bednárová L., Veverka V., Vacek J. (2018), Structural Stability of Peptidic His-Containing Proton Wire in Solution and in the Adsorbed State, Langmuir

Anwar S.E., Holub J., Tok O., Jelínek T., Ruzickova Z., Fojt L., Solínova V, Kasicka V., Grüner B. (2018), Synthesis and selected properties of nonahalogenated 2-ammoniodecaborate anions and their derivatives substituted at N-centre, Journal of Organometallic Chemistry

Sováková PP, Magdolenová A, Konečná K, Rájecká V, Fajkus J, Fojtová M. (2018), Telomere elongation upon transfer to callus culture reflects the reprogramming of telomere stability control in Arabidopsis, Plant Mol Biol. 2018;98(1-2):81-99. doi: 10.1007/s11103-018-0765-2.

Brázda V., Červeň J., Bartas M., Mikysková N., Coufal J. and Pečinka P. (2018), The Amino Acid Composition of Quadruplex Binding Proteins Reveals a Shared Motif and Predicts New Potential Quadruplex Interactors, Molecules

Puterova J, Kubat Z, Kejnovsky E, Jesionek W, Cizkova J, Vyskot B, Hobza R (2018), The slowdown of Y chromosome expansion in dioecious Silene latifolia due to DNA loss and male-specific silencing of retrotransposons, BMC GENOMICS

Dvořáčková M, Fajkus J. (2018), Visualization of the Nucleolus Using Ethynyl Uridine, Front Plant Sci. 2018;9:177. doi: 10.3389/fpls.2018.00177

Vosáhlová J., Koláčná L., Daňhel A., Fischer J., Balintová J., Hocek M. Schwarzová-Pecková K., Fojta M. (2018), Voltammetric and adsorption study of 4-nitrophenyl-triazole-labeled 2′- deoxycytidine and 7-deazaadenosine nucleosides at boron-doped diamond electrode, Journal of Electroanalytical Chemistry

Gajdár J., Goněc T., Jampílek J., Brázdová M., Bábková Z., Fojta M., Barek J., Fischer J. (2018), Voltammetry of a Novel Antimycobacterial Agent 1-Hydroxy-N-(4-nitrophenyl)naphthalene-2-carboxamide in a Single Drop of a Solution, Electroanalysis

Dvořáková Z., Renčiuk D., Kejnovská I., Školáková P., Bednářová K., Sagi J., Vorlíčková M. (2018), i-Motif of cytosine-rich human telomere DNA fragments containing natural base lesions., Nucl. Acids Res, 46, 1624-1634

Cechova J., Confal J., Jagelska E., Fojta M., Brazda V. (2018), p73, like its p53 homolog, shows preference for inverted repeats forming cruciforms, PLOS ONE