Cluster no. 303
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Cluster is part of supercluster: 200
Cluster characteristics:
| size |
182 |
| size_real |
182 |
| ecount |
1010 |
| supercluster |
200 |
| annotations_summary |
|
| pair_completeness |
0.504132231404959 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.197802197802198 |
| satellite_probability |
2.39471466392162e-12 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
0 |
| S5 |
56 |
| S4 |
70 |
| S7 |
0 |
| S9 |
0 |
| S6 |
56 |
| S2 |
0 |
| S1 |
0 |
| S3 |
0 |
comparative analysis - number of edges between species:
|
S8 |
S5 |
S4 |
S7 |
S9 |
S6 |
S2 |
S1 |
S3 |
| S8 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S5 |
0 |
91 |
114 |
0 |
0 |
106 |
0 |
0 |
0 |
| S4 |
0 |
114 |
140 |
0 |
0 |
109 |
0 |
0 |
0 |
| S7 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S9 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S6 |
0 |
106 |
109 |
0 |
0 |
120 |
0 |
0 |
0 |
| S2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S3 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S5 |
S4 |
S7 |
S9 |
S6 |
S2 |
S1 |
S3 |
| S8 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S5 |
NA |
0.947 |
1.020 |
NA |
NA |
1.030 |
NA |
NA |
NA |
| S4 |
NA |
1.020 |
1.070 |
NA |
NA |
0.904 |
NA |
NA |
NA |
| S7 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S9 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S6 |
NA |
1.030 |
0.904 |
NA |
NA |
1.080 |
NA |
NA |
NA |
| S2 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S1 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S3 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 25 |
29 |
0.037 |
| 56 |
2 |
0.00307 |
| 68200 |
2 |
0.0645 |
| 3010 |
1 |
0.0303 |
| 12100 |
1 |
0.0328 |
| 14700 |
1 |
0.0317 |
| 34700 |
1 |
0.0323 |
| 44400 |
1 |
0.0323 |
| 61600 |
1 |
0.0323 |
|
CL303 ----> CL25
No. of shared pairs: :29