| size | 191 |
| size_real | 191 |
| ecount | 712 |
| supercluster | 196 |
| annotations_summary | 9.42% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG 1.57% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-GAG |
| pair_completeness | 0.660869565217391 |
| pbs_score | None |
| TR_score | None |
| TR_monomer_length | None |
| loop_index | 0.00523560209424084 |
| satellite_probability | 2.15999844156912e-21 |
| consensus | None |
| TAREAN_annotation | Other |
| orientation_score | 1 |
| Species | Read count |
|---|---|
| S8 | 0 |
| S5 | 64 |
| S4 | 62 |
| S7 | 0 |
| S9 | 2 |
| S6 | 63 |
| S2 | 0 |
| S1 | 0 |
| S3 | 0 |
| S8 | S5 | S4 | S7 | S9 | S6 | S2 | S1 | S3 | |
|---|---|---|---|---|---|---|---|---|---|
| S8 | 0 | 0.0 | 0.0 | 0 | 0.0 | 0.0 | 0 | 0 | 0 |
| S5 | 0 | 75.0 | 72.0 | 0 | 3.5 | 87.5 | 0 | 0 | 0 |
| S4 | 0 | 72.0 | 77.0 | 0 | 1.5 | 77.0 | 0 | 0 | 0 |
| S7 | 0 | 0.0 | 0.0 | 0 | 0.0 | 0.0 | 0 | 0 | 0 |
| S9 | 0 | 3.5 | 1.5 | 0 | 0.0 | 2.5 | 0 | 0 | 0 |
| S6 | 0 | 87.5 | 77.0 | 0 | 2.5 | 72.0 | 0 | 0 | 0 |
| S2 | 0 | 0.0 | 0.0 | 0 | 0.0 | 0.0 | 0 | 0 | 0 |
| S1 | 0 | 0.0 | 0.0 | 0 | 0.0 | 0.0 | 0 | 0 | 0 |
| S3 | 0 | 0.0 | 0.0 | 0 | 0.0 | 0.0 | 0 | 0 | 0 |
| S8 | S5 | S4 | S7 | S9 | S6 | S2 | S1 | S3 | |
|---|---|---|---|---|---|---|---|---|---|
| S8 | NA | NA | NA | NA | NA | NA | NA | NA | NA |
| S5 | NA | 0.943 | 0.947 | NA | 1.400 | 1.100 | NA | NA | NA |
| S4 | NA | 0.947 | 1.060 | NA | 0.626 | 1.010 | NA | NA | NA |
| S7 | NA | NA | NA | NA | NA | NA | NA | NA | NA |
| S9 | NA | 1.400 | 0.626 | NA | 0.000 | 0.993 | NA | NA | NA |
| S6 | NA | 1.100 | 1.010 | NA | 0.993 | 0.897 | NA | NA | NA |
| S2 | NA | NA | NA | NA | NA | NA | NA | NA | NA |
| S1 | NA | NA | NA | NA | NA | NA | NA | NA | NA |
| S3 | NA | NA | NA | NA | NA | NA | NA | NA | NA |
protein domains:
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