Cluster no. 295
Go back to cluster table
Cluster is part of supercluster: 192
Cluster characteristics:
| size |
204 |
| size_real |
204 |
| ecount |
771 |
| supercluster |
192 |
| annotations_summary |
|
| pair_completeness |
0.436619718309859 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00490196078431373 |
| satellite_probability |
4.69379822868744e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
0 |
| S5 |
66 |
| S4 |
91 |
| S7 |
0 |
| S9 |
0 |
| S6 |
47 |
| S2 |
0 |
| S1 |
0 |
| S3 |
0 |
comparative analysis - number of edges between species:
|
S8 |
S5 |
S4 |
S7 |
S9 |
S6 |
S2 |
S1 |
S3 |
| S8 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S5 |
0 |
84 |
106 |
0 |
0 |
74 |
0 |
0 |
0 |
| S4 |
0 |
106 |
103 |
0 |
0 |
85 |
0 |
0 |
0 |
| S7 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S9 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S6 |
0 |
74 |
85 |
0 |
0 |
54 |
0 |
0 |
0 |
| S2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S3 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S5 |
S4 |
S7 |
S9 |
S6 |
S2 |
S1 |
S3 |
| S8 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S5 |
NA |
0.929 |
1.050 |
NA |
NA |
1.010 |
NA |
NA |
NA |
| S4 |
NA |
1.050 |
0.919 |
NA |
NA |
1.050 |
NA |
NA |
NA |
| S7 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S9 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S6 |
NA |
1.010 |
1.050 |
NA |
NA |
0.918 |
NA |
NA |
NA |
| S2 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S1 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S3 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 80 |
3 |
0.00385 |
| 4200 |
3 |
0.0706 |
| 6210 |
3 |
0.0706 |
| 6790 |
3 |
0.0706 |
| 2980 |
2 |
0.0471 |
| 10000 |
2 |
0.0488 |
| 14 |
1 |
0.000607 |
| 74 |
1 |
0.00273 |
| 81 |
1 |
0.00244 |
| 93 |
1 |
0.00144 |
| 95 |
1 |
0.00171 |
| 11200 |
1 |
0.0241 |
| 13300 |
1 |
0.0241 |
| 23100 |
1 |
0.0244 |
| 39000 |
1 |
0.0244 |
| 49400 |
1 |
0.0244 |
|