Cluster no. 293
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Cluster is part of supercluster: 190
Cluster characteristics:
| size |
210 |
| size_real |
210 |
| ecount |
911 |
| supercluster |
190 |
| annotations_summary |
|
| pair_completeness |
0.640625 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00476190476190476 |
| satellite_probability |
4.28947468612038e-22 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
1 |
| S5 |
68 |
| S4 |
80 |
| S7 |
0 |
| S9 |
0 |
| S6 |
61 |
| S2 |
0 |
| S1 |
0 |
| S3 |
0 |
comparative analysis - number of edges between species:
|
S8 |
S5 |
S4 |
S7 |
S9 |
S6 |
S2 |
S1 |
S3 |
| S8 |
0.0 |
0.5 |
0 |
0 |
0 |
0.0 |
0 |
0 |
0 |
| S5 |
0.5 |
98.0 |
116 |
0 |
0 |
78.5 |
0 |
0 |
0 |
| S4 |
0.0 |
116.0 |
135 |
0 |
0 |
112.0 |
0 |
0 |
0 |
| S7 |
0.0 |
0.0 |
0 |
0 |
0 |
0.0 |
0 |
0 |
0 |
| S9 |
0.0 |
0.0 |
0 |
0 |
0 |
0.0 |
0 |
0 |
0 |
| S6 |
0.0 |
78.5 |
112 |
0 |
0 |
62.0 |
0 |
0 |
0 |
| S2 |
0.0 |
0.0 |
0 |
0 |
0 |
0.0 |
0 |
0 |
0 |
| S1 |
0.0 |
0.0 |
0 |
0 |
0 |
0.0 |
0 |
0 |
0 |
| S3 |
0.0 |
0.0 |
0 |
0 |
0 |
0.0 |
0 |
0 |
0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S5 |
S4 |
S7 |
S9 |
S6 |
S2 |
S1 |
S3 |
| S8 |
0.0 |
3.100 |
0.000 |
NA |
NA |
0.000 |
NA |
NA |
NA |
| S5 |
3.1 |
1.040 |
0.993 |
NA |
NA |
0.963 |
NA |
NA |
NA |
| S4 |
0.0 |
0.993 |
0.928 |
NA |
NA |
1.110 |
NA |
NA |
NA |
| S7 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S9 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S6 |
0.0 |
0.963 |
1.110 |
NA |
NA |
0.882 |
NA |
NA |
NA |
| S2 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S1 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S3 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 358 |
6 |
0.162 |
| 530 |
5 |
0.137 |
| 61 |
2 |
0.00232 |
| 5620 |
2 |
0.0784 |
| 12600 |
2 |
0.0816 |
| 56 |
1 |
0.00155 |
| 215 |
1 |
0.022 |
| 236 |
1 |
0.00909 |
| 24300 |
1 |
0.0417 |
| 69600 |
1 |
0.0417 |
|