Cluster no. 291
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Cluster is part of supercluster: 188
Cluster characteristics:
| size |
214 |
| size_real |
214 |
| ecount |
347 |
| supercluster |
188 |
| annotations_summary |
|
| pair_completeness |
0.202247191011236 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00467289719626168 |
| satellite_probability |
1.59414194961086e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
0 |
| S5 |
83 |
| S4 |
61 |
| S7 |
0 |
| S9 |
0 |
| S6 |
69 |
| S2 |
1 |
| S1 |
0 |
| S3 |
0 |
comparative analysis - number of edges between species:
|
S8 |
S5 |
S4 |
S7 |
S9 |
S6 |
S2 |
S1 |
S3 |
| S8 |
0 |
0.0 |
0.0 |
0 |
0 |
0.0 |
0.0 |
0 |
0 |
| S5 |
0 |
57.0 |
41.0 |
0 |
0 |
36.0 |
0.5 |
0 |
0 |
| S4 |
0 |
41.0 |
27.0 |
0 |
0 |
33.5 |
0.0 |
0 |
0 |
| S7 |
0 |
0.0 |
0.0 |
0 |
0 |
0.0 |
0.0 |
0 |
0 |
| S9 |
0 |
0.0 |
0.0 |
0 |
0 |
0.0 |
0.0 |
0 |
0 |
| S6 |
0 |
36.0 |
33.5 |
0 |
0 |
41.0 |
0.0 |
0 |
0 |
| S2 |
0 |
0.5 |
0.0 |
0 |
0 |
0.0 |
0.0 |
0 |
0 |
| S1 |
0 |
0.0 |
0.0 |
0 |
0 |
0.0 |
0.0 |
0 |
0 |
| S3 |
0 |
0.0 |
0.0 |
0 |
0 |
0.0 |
0.0 |
0 |
0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S5 |
S4 |
S7 |
S9 |
S6 |
S2 |
S1 |
S3 |
| S8 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S5 |
NA |
1.090 |
1.040 |
NA |
NA |
0.841 |
2.58 |
NA |
NA |
| S4 |
NA |
1.040 |
0.909 |
NA |
NA |
1.040 |
0.00 |
NA |
NA |
| S7 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S9 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S6 |
NA |
0.841 |
1.040 |
NA |
NA |
1.170 |
0.00 |
NA |
NA |
| S2 |
NA |
2.580 |
0.000 |
NA |
NA |
0.000 |
0.00 |
NA |
NA |
| S1 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S3 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 609 |
2 |
0.023 |
| 871 |
2 |
0.025 |
| 9630 |
2 |
0.0274 |
| 48 |
1 |
0.000957 |
| 141 |
1 |
0.00404 |
| 165 |
1 |
0.00498 |
| 194 |
1 |
0.00593 |
| 559 |
1 |
0.0111 |
| 2400 |
1 |
0.0133 |
| 4200 |
1 |
0.0136 |
| 7110 |
1 |
0.0136 |
| 9890 |
1 |
0.0139 |
| 16700 |
1 |
0.0138 |
| 22300 |
1 |
0.0139 |
| 54800 |
1 |
0.0139 |
| 55100 |
1 |
0.0139 |
| 66000 |
1 |
0.0139 |
| 67700 |
1 |
0.0139 |
|