| size | 299 |
| size_real | 299 |
| ecount | 679 |
| supercluster | 165 |
| annotations_summary | 0.33% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-GAG |
| pair_completeness | 0.748538011695906 |
| pbs_score | None |
| TR_score | None |
| TR_monomer_length | None |
| loop_index | 0.00334448160535117 |
| satellite_probability | 6.84243327814155e-23 |
| consensus | None |
| TAREAN_annotation | Other |
| orientation_score | 1 |
| Species | Read count |
|---|---|
| S8 | 103 |
| S5 | 0 |
| S4 | 0 |
| S7 | 108 |
| S9 | 83 |
| S6 | 3 |
| S2 | 2 |
| S1 | 0 |
| S3 | 0 |
| S8 | S5 | S4 | S7 | S9 | S6 | S2 | S1 | S3 | |
|---|---|---|---|---|---|---|---|---|---|
| S8 | 86.0 | 0 | 0 | 93.5 | 57.5 | 2.5 | 2.0 | 0 | 0 |
| S5 | 0.0 | 0 | 0 | 0.0 | 0.0 | 0.0 | 0.0 | 0 | 0 |
| S4 | 0.0 | 0 | 0 | 0.0 | 0.0 | 0.0 | 0.0 | 0 | 0 |
| S7 | 93.5 | 0 | 0 | 73.0 | 75.0 | 0.0 | 3.0 | 0 | 0 |
| S9 | 57.5 | 0 | 0 | 75.0 | 48.0 | 1.5 | 0.5 | 0 | 0 |
| S6 | 2.5 | 0 | 0 | 0.0 | 1.5 | 0.0 | 0.0 | 0 | 0 |
| S2 | 2.0 | 0 | 0 | 3.0 | 0.5 | 0.0 | 1.0 | 0 | 0 |
| S1 | 0.0 | 0 | 0 | 0.0 | 0.0 | 0.0 | 0.0 | 0 | 0 |
| S3 | 0.0 | 0 | 0 | 0.0 | 0.0 | 0.0 | 0.0 | 0 | 0 |
| S8 | S5 | S4 | S7 | S9 | S6 | S2 | S1 | S3 | |
|---|---|---|---|---|---|---|---|---|---|
| S8 | 1.000 | NA | NA | 1.080 | 0.886 | 1.76 | 0.865 | NA | NA |
| S5 | NA | NA | NA | NA | NA | NA | NA | NA | NA |
| S4 | NA | NA | NA | NA | NA | NA | NA | NA | NA |
| S7 | 1.080 | NA | NA | 0.829 | 1.140 | 0.00 | 1.280 | NA | NA |
| S9 | 0.886 | NA | NA | 1.140 | 0.979 | 1.40 | 0.286 | NA | NA |
| S6 | 1.760 | NA | NA | 0.000 | 1.400 | 0.00 | 0.000 | NA | NA |
| S2 | 0.865 | NA | NA | 1.280 | 0.286 | 0.00 | 16.100 | NA | NA |
| S1 | NA | NA | NA | NA | NA | NA | NA | NA | NA |
| S3 | NA | NA | NA | NA | NA | NA | NA | NA | NA |
protein domains:
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