Cluster no. 266
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Cluster is part of supercluster: 164
Cluster characteristics:
| size |
305 |
| size_real |
305 |
| ecount |
2358 |
| supercluster |
164 |
| annotations_summary |
|
| pair_completeness |
0.666666666666667 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.662295081967213 |
| satellite_probability |
0.00537290618477483 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
0 |
| S5 |
117 |
| S4 |
103 |
| S7 |
0 |
| S9 |
2 |
| S6 |
83 |
| S2 |
0 |
| S1 |
0 |
| S3 |
0 |
comparative analysis - number of edges between species:
|
S8 |
S5 |
S4 |
S7 |
S9 |
S6 |
S2 |
S1 |
S3 |
| S8 |
0 |
0 |
0.0 |
0 |
0.0 |
0.0 |
0 |
0 |
0 |
| S5 |
0 |
329 |
322.0 |
0 |
4.0 |
220.0 |
0 |
0 |
0 |
| S4 |
0 |
322 |
334.0 |
0 |
2.5 |
227.0 |
0 |
0 |
0 |
| S7 |
0 |
0 |
0.0 |
0 |
0.0 |
0.0 |
0 |
0 |
0 |
| S9 |
0 |
4 |
2.5 |
0 |
0.0 |
2.5 |
0 |
0 |
0 |
| S6 |
0 |
220 |
227.0 |
0 |
2.5 |
138.0 |
0 |
0 |
0 |
| S2 |
0 |
0 |
0.0 |
0 |
0.0 |
0.0 |
0 |
0 |
0 |
| S1 |
0 |
0 |
0.0 |
0 |
0.0 |
0.0 |
0 |
0 |
0 |
| S3 |
0 |
0 |
0.0 |
0 |
0.0 |
0.0 |
0 |
0 |
0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S5 |
S4 |
S7 |
S9 |
S6 |
S2 |
S1 |
S3 |
| S8 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S5 |
NA |
1.010 |
0.979 |
NA |
1.20 |
1.010 |
NA |
NA |
NA |
| S4 |
NA |
0.979 |
1.000 |
NA |
0.74 |
1.030 |
NA |
NA |
NA |
| S7 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S9 |
NA |
1.200 |
0.740 |
NA |
0.00 |
1.110 |
NA |
NA |
NA |
| S6 |
NA |
1.010 |
1.030 |
NA |
1.11 |
0.941 |
NA |
NA |
NA |
| S2 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S1 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S3 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 236 |
8 |
0.0681 |
| 715 |
4 |
0.105 |
| 13 |
1 |
0.000644 |
| 14 |
1 |
0.000611 |
| 43 |
1 |
0.000776 |
| 84 |
1 |
0.00129 |
| 95 |
1 |
0.00173 |
| 100 |
1 |
0.00218 |
| 252 |
1 |
0.00901 |
| 5530 |
1 |
0.0312 |
| 19400 |
1 |
0.0323 |
| 31300 |
1 |
0.0317 |
| 53700 |
1 |
0.0317 |
|