Cluster no. 256

Cluster no. 256

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Cluster is part of supercluster: 154

Cluster characteristics:

size	355
size_real	355
ecount	1087
supercluster	154
annotations_summary
pair_completeness	0.42
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.0028169014084507
satellite_probability	5.57078696969618e-21
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	120
S5	0
S4	0
S7	122
S9	113
S6	0
S2	0
S1	0
S3	0

comparative analysis - number of edges between species:

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	137	0	0	129	131	0	0	0	0
S5	0	0	0	0	0	0	0	0	0
S4	0	0	0	0	0	0	0	0	0
S7	129	0	0	103	104	0	0	0	0
S9	131	0	0	104	120	0	0	0	0
S6	0	0	0	0	0	0	0	0	0
S2	0	0	0	0	0	0	0	0	0
S1	0	0	0	0	0	0	0	0	0
S3	0	0	0	0	0	0	0	0	0

comparative analysis - observed/expected number of edges between species

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	0.945	NA	NA	1.050	1.010	NA	NA	NA	NA
S5	NA	NA	NA	NA	NA	NA	NA	NA	NA
S4	NA	NA	NA	NA	NA	NA	NA	NA	NA
S7	1.050	NA	NA	0.995	0.946	NA	NA	NA	NA
S9	1.010	NA	NA	0.946	1.040	NA	NA	NA	NA
S6	NA	NA	NA	NA	NA	NA	NA	NA	NA
S2	NA	NA	NA	NA	NA	NA	NA	NA	NA
S1	NA	NA	NA	NA	NA	NA	NA	NA	NA
S3	NA	NA	NA	NA	NA	NA	NA	NA	NA

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

5	10
46	3

clusters connected through mates:

Cluster	Number of shared read pairs	k

5	19	0.00983
46	19	0.0193
372	11	0.12
3680	7	0.0921
6520	2	0.0267
9440	2	0.0268
14500	2	0.027
42900	2	0.0272
53900	2	0.0272
4	1	0.000599
8	1	0.00053
18	1	0.000752
54	1	0.0011
59	1	0.000802
4690	1	0.0136
7170	1	0.0133
7200	1	0.0137
8940	1	0.0134
10100	1	0.0134
18400	1	0.0135
18700	1	0.0137
22500	1	0.0136
23600	1	0.0136
40400	1	0.0136
42400	1	0.0136
49000	1	0.0136
62900	1	0.0136

CL256 ----> CL5

No. of shared pairs: :19

CL256 ----> CL46

No. of shared pairs: :19

CL256 ----> CL372

No. of shared pairs: :11