Cluster no. 213

Cluster no. 213

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Cluster is part of supercluster: 114

Cluster characteristics:

size	733
size_real	733
ecount	2163
supercluster	114
annotations_summary
pair_completeness	0.428849902534113
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.00545702592087312
satellite_probability	1.0041894271145e-20
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	264
S5	3
S4	3
S7	207
S9	250
S6	4
S2	0
S1	1
S3	1

comparative analysis - number of edges between species:

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	302.0	4.5	0.5	224.0	258.0	11.5	0	0.5	1.0
S5	4.5	0.0	0.0	2.5	2.0	0.5	0	0.0	0.0
S4	0.5	0.0	0.0	1.0	3.5	0.0	0	0.0	0.0
S7	224.0	2.5	1.0	134.0	214.0	4.0	0	0.0	0.5
S9	258.0	2.0	3.5	214.0	259.0	4.5	0	0.0	0.5
S6	11.5	0.5	0.0	4.0	4.5	1.0	0	0.0	0.0
S2	0.0	0.0	0.0	0.0	0.0	0.0	0	0.0	0.0
S1	0.5	0.0	0.0	0.0	0.0	0.0	0	0.0	0.0
S3	1.0	0.0	0.0	0.5	0.5	0.0	0	0.0	0.0

comparative analysis - observed/expected number of edges between species

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	1.020	1.280	0.270	1.040	0.937	1.440	NA	2.7	1.350
S5	1.280	0.000	0.000	0.980	0.614	5.290	NA	0.0	0.000
S4	0.270	0.000	0.000	0.745	2.040	0.000	NA	0.0	0.000
S7	1.040	0.980	0.745	0.859	1.080	0.693	NA	0.0	0.931
S9	0.937	0.614	2.040	1.080	1.020	0.611	NA	0.0	0.729
S6	1.440	5.290	0.000	0.693	0.611	4.680	NA	0.0	0.000
S2	NA	NA	NA	NA	NA	NA	NA	NA	NA
S1	2.700	0.000	0.000	0.000	0.000	0.000	NA	0.0	0.000
S3	1.350	0.000	0.000	0.931	0.729	0.000	NA	0.0	0.000

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

9	14
4	1
12	1
103	1

clusters connected through mates:

Cluster	Number of shared read pairs	k

9	41	0.0486
4	36	0.0206
12	32	0.0239
203	17	0.055
426	7	0.0433
1090	7	0.0455
2500	7	0.0465
103	6	0.0151
538	6	0.0381
1730	5	0.0327
2120	5	0.0329
387	4	0.0248
4050	4	0.0267
53	3	0.00427
1700	3	0.0197
3040	3	0.0199
10900	2	0.0136
12200	2	0.0135
21100	2	0.0136
34500	2	0.0136
48900	2	0.0136
8	1	0.00051
11	1	0.000721
54	1	0.00102
248	1	0.00463
1880	1	0.0066
2080	1	0.00658
6520	1	0.00671
7160	1	0.00671
7320	1	0.00671
8440	1	0.00673
10400	1	0.00678
10500	1	0.00673
11700	1	0.00676
12700	1	0.00676
19100	1	0.00676
19200	1	0.00676
19400	1	0.00676
23500	1	0.00678
34300	1	0.00678
36400	1	0.00678
38500	1	0.00678
40900	1	0.00678

CL213 ----> CL9

No. of shared pairs: :41

CL213 ----> CL4

No. of shared pairs: :36

CL213 ----> CL12

No. of shared pairs: :32

CL213 ----> CL203

No. of shared pairs: :17