Cluster no. 206

Cluster no. 206

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Cluster is part of supercluster: 106

Cluster characteristics:

size	809
size_real	809
ecount	2510
supercluster	106
annotations_summary
pair_completeness	0.380546075085324
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.00494437577255871
satellite_probability	7.55887620545779e-21
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	278
S5	2
S4	0
S7	269
S9	255
S6	0
S2	2
S1	2
S3	1

comparative analysis - number of edges between species:

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	335.0	0.0	0	282.0	265.0	0	0.0	3.0	1.5
S5	0.0	0.0	0	0.5	0.5	0	0.0	0.0	0.0
S4	0.0	0.0	0	0.0	0.0	0	0.0	0.0	0.0
S7	282.0	0.5	0	287.0	261.0	0	0.5	4.5	1.0
S9	265.0	0.5	0	261.0	246.0	0	0.5	1.5	0.0
S6	0.0	0.0	0	0.0	0.0	0	0.0	0.0	0.0
S2	0.0	0.0	0	0.5	0.5	0	0.0	0.0	0.0
S1	3.0	0.0	0	4.5	1.5	0	0.0	0.0	0.0
S3	1.5	0.0	0	1.0	0.0	0	0.0	0.0	0.0

comparative analysis - observed/expected number of edges between species

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	1.070	0.00	NA	0.954	0.969	NA	0.00	0.944	1.7
S5	0.000	0.00	NA	1.500	1.620	NA	0.00	0.000	0.0
S4	NA	NA	NA	NA	NA	NA	NA	NA	NA
S7	0.954	1.50	NA	1.030	1.010	NA	1.50	1.500	1.2
S9	0.969	1.62	NA	1.010	1.030	NA	1.62	0.540	0.0
S6	NA	NA	NA	NA	NA	NA	NA	NA	NA
S2	0.000	0.00	NA	1.500	1.620	NA	0.00	0.000	0.0
S1	0.944	0.00	NA	1.500	0.540	NA	0.00	0.000	0.0
S3	1.700	0.00	NA	1.200	0.000	NA	0.00	0.000	0.0

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

68	5
36	3

clusters connected through mates:

Cluster	Number of shared read pairs	k

36	32	0.0285
68	23	0.0237
251	4	0.0148
6900	3	0.0163
4	2	0.00112
11	2	0.00141
3270	2	0.0108
4400	2	0.0108
9580	2	0.0109
15300	2	0.0109
16500	2	0.0109
18900	2	0.0109
34800	2	0.011
35000	2	0.011
35400	2	0.011
37900	2	0.011
46900	2	0.011
57100	2	0.011
8	1	0.000501
14	1	0.000559
22	1	0.000553
53	1	0.00136
54	1	0.000983
198	1	0.00275
244	1	0.00483
492	1	0.00512
8480	1	0.00545
8630	1	0.00548
11400	1	0.00546
13500	1	0.00546
14500	1	0.00546
15500	1	0.00546
18900	1	0.00546
23100	1	0.00548
25100	1	0.00548
31500	1	0.00548
33000	1	0.00548
35900	1	0.00548
43800	1	0.00548
46900	1	0.00548
53600	1	0.00548
56600	1	0.00548
58700	1	0.00548
58800	1	0.00548
62700	1	0.00548
65300	1	0.00548

CL206 ----> CL36

No. of shared pairs: :32

CL206 ----> CL68

No. of shared pairs: :23