Cluster no. 203

Cluster no. 203

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Cluster is part of supercluster: 103

Cluster characteristics:

size	837
size_real	837
ecount	3143
supercluster	103
annotations_summary
pair_completeness	0.440619621342513
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.00955794504181601
satellite_probability	9.71787494816826e-21
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	275
S5	3
S4	0
S7	265
S9	291
S6	1
S2	0
S1	0
S3	2

comparative analysis - number of edges between species:

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	327.0	1.0	0	319.0	341.0	0.5	0	0	1.0
S5	1.0	1.0	0	2.5	2.5	0.0	0	0	0.0
S4	0.0	0.0	0	0.0	0.0	0.0	0	0	0.0
S7	319.0	2.5	0	381.0	365.0	1.0	0	0	0.5
S9	341.0	2.5	0	365.0	363.0	0.0	0	0	1.5
S6	0.5	0.0	0	1.0	0.0	0.0	0	0	0.0
S2	0.0	0.0	0	0.0	0.0	0.0	0	0	0.0
S1	0.0	0.0	0	0.0	0.0	0.0	0	0	0.0
S3	1.0	0.0	0	0.5	1.5	0.0	0	0	0.0

comparative analysis - observed/expected number of edges between species

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	1.050	0.454	NA	0.948	1.010	1.06	NA	NA	1.06
S5	0.454	64.100	NA	1.050	1.050	0.00	NA	NA	0.00
S4	NA	NA	NA	NA	NA	NA	NA	NA	NA
S7	0.948	1.050	NA	1.050	1.000	1.96	NA	NA	0.49
S9	1.010	1.050	NA	1.000	0.991	0.00	NA	NA	1.46
S6	1.060	0.000	NA	1.960	0.000	0.00	NA	NA	0.00
S2	NA	NA	NA	NA	NA	NA	NA	NA	NA
S1	NA	NA	NA	NA	NA	NA	NA	NA	NA
S3	1.060	0.000	NA	0.490	1.460	0.00	NA	NA	0.00

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

9	24
4	21
12	3

clusters connected through mates:

Cluster	Number of shared read pairs	k

4	86	0.0489
9	77	0.0895
12	25	0.0185
213	17	0.055
949	7	0.0412
4120	4	0.0242
91	3	0.00367
103	2	0.00483
167	2	0.0054
2920	2	0.0121
3310	2	0.012
3540	2	0.012
5980	2	0.0121
18400	2	0.0122
32600	2	0.0122
55900	2	0.0122
69100	2	0.0122
8	1	0.000506
11	1	0.000713
21	1	0.00156
53	1	0.00139
69	1	0.000778
4050	1	0.00602
10000	1	0.00608
16300	1	0.0061
17600	1	0.0061
26000	1	0.00612
34100	1	0.00612
62500	1	0.00612

CL203 ----> CL4

No. of shared pairs: :86

CL203 ----> CL9

No. of shared pairs: :77

CL203 ----> CL12

No. of shared pairs: :25

CL203 ----> CL213

No. of shared pairs: :17