Cluster no. 202

Cluster no. 202

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Cluster is part of supercluster: 102

Cluster characteristics:

size	852
size_real	852
ecount	6985
supercluster	102
annotations_summary
pair_completeness	0.693836978131213
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.244131455399061
satellite_probability	7.08445668487276e-12
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	0
S5	1
S4	0
S7	0
S9	0
S6	2
S2	295
S1	255
S3	299

comparative analysis - number of edges between species:

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	0	0.0	0	0	0	0.0	0	0	0.0
S5	0	0.0	0	0	0	0.0	0	0	0.5
S4	0	0.0	0	0	0	0.0	0	0	0.0
S7	0	0.0	0	0	0	0.0	0	0	0.0
S9	0	0.0	0	0	0	0.0	0	0	0.0
S6	0	0.0	0	0	0	1.0	6	8	6.5
S2	0	0.0	0	0	0	6.0	805	728	848.0
S1	0	0.0	0	0	0	8.0	728	600	745.0
S3	0	0.5	0	0	0	6.5	848	745	897.0

comparative analysis - observed/expected number of edges between species

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	NA	NA	NA	NA	NA	NA	NA	NA	NA
S5	NA	0.0	NA	NA	NA	0.000	0.000	0.000	2.800
S4	NA	NA	NA	NA	NA	NA	NA	NA	NA
S7	NA	NA	NA	NA	NA	NA	NA	NA	NA
S9	NA	NA	NA	NA	NA	NA	NA	NA	NA
S6	NA	0.0	NA	NA	NA	15.100	0.817	1.250	0.846
S2	NA	0.0	NA	NA	NA	0.817	0.988	1.020	0.994
S1	NA	0.0	NA	NA	NA	1.250	1.020	0.968	1.000
S3	NA	2.8	NA	NA	NA	0.846	0.994	1.000	1.010

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

42	11
98	7
85	3

clusters connected through mates:

Cluster	Number of shared read pairs	k

42	20	0.0304
85	13	0.0223
98	13	0.0264
4240	7	0.087
189	3	0.0145
9420	3	0.038
686	2	0.0231
29300	2	0.0256
37900	2	0.0256
50300	2	0.0256
7	1	0.00066
46	1	0.00101
58	1	0.00153
108	1	0.00205
113	1	0.00218
10700	1	0.0127
14700	1	0.0129
32900	1	0.0128
61200	1	0.0128
61700	1	0.0128

CL202 ----> CL42

No. of shared pairs: :20

CL202 ----> CL85

No. of shared pairs: :13

CL202 ----> CL98

No. of shared pairs: :13