Cluster no. 195
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Cluster is part of supercluster: 98
Cluster characteristics:
| size |
969 |
| size_real |
969 |
| ecount |
10342 |
| supercluster |
98 |
| annotations_summary |
|
| pair_completeness |
0.612312811980033 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00103199174406605 |
| satellite_probability |
6.64175142550315e-22 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
0 |
| S5 |
322 |
| S4 |
318 |
| S7 |
0 |
| S9 |
0 |
| S6 |
329 |
| S2 |
0 |
| S1 |
0 |
| S3 |
0 |
comparative analysis - number of edges between species:
|
S8 |
S5 |
S4 |
S7 |
S9 |
S6 |
S2 |
S1 |
S3 |
| S8 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S5 |
0 |
1050 |
1170 |
0 |
0 |
1120 |
0 |
0 |
0 |
| S4 |
0 |
1170 |
1200 |
0 |
0 |
1180 |
0 |
0 |
0 |
| S7 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S9 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S6 |
0 |
1120 |
1180 |
0 |
0 |
1160 |
0 |
0 |
0 |
| S2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
| S3 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S5 |
S4 |
S7 |
S9 |
S6 |
S2 |
S1 |
S3 |
| S8 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S5 |
NA |
0.974 |
1.020 |
NA |
NA |
1.000 |
NA |
NA |
NA |
| S4 |
NA |
1.020 |
0.986 |
NA |
NA |
0.994 |
NA |
NA |
NA |
| S7 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S9 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S6 |
NA |
1.000 |
0.994 |
NA |
NA |
1.000 |
NA |
NA |
NA |
| S2 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S1 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
| S3 |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 6 |
3 |
0.00109 |
| 3 |
2 |
0.000681 |
| 39 |
2 |
0.00186 |
| 48 |
2 |
0.00183 |
| 13 |
1 |
0.00061 |
| 29 |
1 |
0.000866 |
| 31 |
1 |
0.00115 |
| 61 |
1 |
0.00105 |
| 62 |
1 |
0.00187 |
| 75 |
1 |
0.00138 |
| 95 |
1 |
0.00151 |
| 97 |
1 |
0.00338 |
| 722 |
1 |
0.00772 |
| 1090 |
1 |
0.00816 |
| 36200 |
1 |
0.00851 |
| 59700 |
1 |
0.00851 |
|