Cluster no. 161

Cluster no. 161

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Cluster is part of supercluster: 1

Cluster characteristics:

size	1688
size_real	1688
ecount	51813
supercluster	1
annotations_summary
pair_completeness	0.387017255546426
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.0503554502369668
satellite_probability	2.84259797052513e-18
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	1
S5	579
S4	566
S7	2
S9	0
S6	537
S2	1
S1	0
S3	2

comparative analysis - number of edges between species:

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	0.0	17.0	18.5	0.0	0	15.5	0.0	0	0.0
S5	17.0	5980.0	5880.0	17.0	0	5780.0	7.5	0	25.5
S4	18.5	5880.0	5540.0	13.0	0	5530.0	3.5	0	27.5
S7	0.0	17.0	13.0	0.0	0	15.0	0.0	0	0.5
S9	0.0	0.0	0.0	0.0	0	0.0	0.0	0	0.0
S6	15.5	5780.0	5530.0	15.0	0	5520.0	2.0	0	22.0
S2	0.0	7.5	3.5	0.0	0	2.0	0.0	0	0.0
S1	0.0	0.0	0.0	0.0	0	0.0	0.0	0	0.0
S3	0.0	25.5	27.5	0.5	0	22.0	0.0	0	0.0

comparative analysis - observed/expected number of edges between species

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	0.000	0.975	1.100	0.00	NA	0.932	0.000	NA	0.000
S5	0.975	0.987	1.010	1.09	NA	1.000	1.690	NA	0.988
S4	1.100	1.010	0.992	0.87	NA	0.996	0.820	NA	1.110
S7	0.000	1.090	0.870	0.00	NA	1.010	0.000	NA	7.540
S9	NA	NA	NA	NA	NA	NA	NA	NA	NA
S6	0.932	1.000	0.996	1.01	NA	1.000	0.472	NA	0.894
S2	0.000	1.690	0.820	0.00	NA	0.472	0.000	NA	0.000
S1	NA	NA	NA	NA	NA	NA	NA	NA	NA
S3	0.000	0.988	1.110	7.54	NA	0.894	0.000	NA	0.000

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

49	1060
47	851
45	162
109	11

clusters connected through mates:

Cluster	Number of shared read pairs	k

49	305	0.159
47	43	0.0325
45	35	0.0194
109	14	0.0168
6280	3	0.00801
12500	3	0.00801
10	2	0.00102
39	2	0.0015
6640	2	0.00534
28900	2	0.00535
42800	2	0.00535
43600	2	0.00535
49900	2	0.00535
51500	2	0.00535
57600	2	0.00535
59000	2	0.00535
70200	2	0.00535
70800	2	0.00535
20	1	0.000779
25	1	0.000887
34	1	0.000645
62	1	0.00126
90	1	0.000958
141	1	0.00182
4240	1	0.00266
5720	1	0.00268
6090	1	0.00266
8910	1	0.00267
9120	1	0.00267
13500	1	0.00267
13500	1	0.00267
14300	1	0.00267
16500	1	0.00268
18700	1	0.00268
19400	1	0.00267
21600	1	0.00267
23000	1	0.00267
25900	1	0.00267
26200	1	0.00267
28000	1	0.00267
29500	1	0.00267
31900	1	0.00267
32000	1	0.00267
34000	1	0.00267
35500	1	0.00267
43000	1	0.00267
44500	1	0.00267
44500	1	0.00267
48100	1	0.00267
50200	1	0.00267
50400	1	0.00267
53600	1	0.00267
53900	1	0.00267
54200	1	0.00267
55900	1	0.00267
57100	1	0.00267
57600	1	0.00267
61000	1	0.00267
61000	1	0.00267
62800	1	0.00267
63300	1	0.00267
64200	1	0.00267
64700	1	0.00267
65900	1	0.00267
67200	1	0.00267
69100	1	0.00267
70400	1	0.00267
70600	1	0.00267

CL161 ----> CL49

No. of shared pairs: :305

CL161 ----> CL47

No. of shared pairs: :43

CL161 ----> CL45

No. of shared pairs: :35

CL161 ----> CL109

No. of shared pairs: :14