Cluster no. 157

Cluster no. 157

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Cluster is part of supercluster: 2

Cluster characteristics:

size	1833
size_real	1833
ecount	27050
supercluster	2
annotations_summary
pair_completeness	0.380271084337349
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.391707583196945
satellite_probability	1.86706298137517e-07
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	563
S5	8
S4	2
S7	641
S9	608
S6	3
S2	3
S1	3
S3	2

comparative analysis - number of edges between species:

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	2570.0	25.5	8.0	2940.0	2710.0	7.5	10.5	11.0	5
S5	25.5	2.0	0.0	29.0	31.5	0.0	0.0	0.0	0
S4	8.0	0.0	0.0	6.5	8.5	0.0	0.0	0.0	0
S7	2940.0	29.0	6.5	3360.0	3130.0	11.5	8.0	15.5	1
S9	2710.0	31.5	8.5	3130.0	3120.0	12.5	13.0	16.5	1
S6	7.5	0.0	0.0	11.5	12.5	0.0	0.0	0.5	0
S2	10.5	0.0	0.0	8.0	13.0	0.0	1.0	0.0	0
S1	11.0	0.0	0.0	15.5	16.5	0.5	0.0	0.0	0
S3	5.0	0.0	0.0	1.0	1.0	0.0	0.0	0.0	0

comparative analysis - observed/expected number of edges between species

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	1.010	0.946	1.140	1.010	0.979	0.765	1.050	0.825	2.330
S5	0.946	6.990	0.000	0.938	1.070	0.000	0.000	0.000	0.000
S4	1.140	0.000	0.000	0.805	1.110	0.000	0.000	0.000	0.000
S7	1.010	0.938	0.805	1.010	0.985	1.020	0.701	1.010	0.407
S9	0.979	1.070	1.110	0.985	1.030	1.170	1.200	1.140	0.428
S6	0.765	0.000	0.000	1.020	1.170	0.000	0.000	9.720	0.000
S2	1.050	0.000	0.000	0.701	1.200	0.000	25.600	0.000	0.000
S1	0.825	0.000	0.000	1.010	1.140	9.720	0.000	0.000	0.000
S3	2.330	0.000	0.000	0.407	0.428	0.000	0.000	0.000	0.000

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

69	715
78	451
5	264
18	31
107	13
51	1

clusters connected through mates:

Cluster	Number of shared read pairs	k

69	247	0.161
78	193	0.128
5	63	0.0277
107	36	0.0367
51	28	0.0173
18	11	0.00659
4	8	0.00398
22	8	0.00392
8	6	0.00269
17	4	0.00197
11	3	0.00182
12	3	0.00187
54	3	0.00241
59	3	0.00189
248	3	0.00624
1100	3	0.00719
3920	3	0.00723
75	2	0.00196
3280	2	0.00484
5080	2	0.00483
6520	2	0.00484
11100	2	0.00484
18400	2	0.00484
27000	2	0.00485
27900	2	0.00485
41800	2	0.00485
58900	2	0.00485
9	1	0.000902
53	1	0.00103
68	1	0.000833
83	1	0.00127
91	1	0.000937
100	1	0.00119
106	1	0.00123
888	1	0.0024
1930	1	0.00241
4820	1	0.00242
5950	1	0.00242
6990	1	0.00242
8640	1	0.00242
13300	1	0.00242
13800	1	0.00243
16400	1	0.00242
28800	1	0.00242
37600	1	0.00242
51600	1	0.00242
53400	1	0.00242
55900	1	0.00242
56900	1	0.00242
60800	1	0.00242
61300	1	0.00242

CL157 ----> CL69

No. of shared pairs: :247

CL157 ----> CL78

No. of shared pairs: :193

CL157 ----> CL5

No. of shared pairs: :63

CL157 ----> CL107

No. of shared pairs: :36

CL157 ----> CL51

No. of shared pairs: :28

CL157 ----> CL18

No. of shared pairs: :11