Cluster no. 153

Cluster no. 153

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Cluster is part of supercluster: 5

Cluster characteristics:

size	2016
size_real	2016
ecount	11882
supercluster	5
annotations_summary
pair_completeness	0.430801987224982
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.000496031746031746
satellite_probability	5.12148319141113e-21
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	2
S5	1
S4	4
S7	4
S9	0
S6	7
S2	665
S1	651
S3	682

comparative analysis - number of edges between species:

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	0.0	0	0.0	0.0	0	0.0	1.0	0.5	1.5
S5	0.0	0	0.0	0.0	0	0.0	9.0	8.0	9.0
S4	0.0	0	2.0	0.0	0	0.0	0.5	2.5	1.5
S7	0.0	0	0.0	0.0	0	0.0	7.0	6.5	10.0
S9	0.0	0	0.0	0.0	0	0.0	0.0	0.0	0.0
S6	0.0	0	0.0	0.0	0	0.0	11.5	15.5	14.0
S2	1.0	9	0.5	7.0	0	11.5	1210.0	1320.0	1190.0
S1	0.5	8	2.5	6.5	0	15.5	1320.0	1500.0	1340.0
S3	1.5	9	1.5	10.0	0	14.0	1190.0	1340.0	1250.0

comparative analysis - observed/expected number of edges between species

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	0.000	0.00	0.000	0.000	NA	0.000	1.050	0.472	1.550
S5	0.000	0.00	0.000	0.000	NA	0.000	1.090	0.870	1.080
S4	0.000	0.00	562.000	0.000	NA	0.000	0.243	1.090	0.717
S7	0.000	0.00	0.000	0.000	NA	0.000	0.942	0.783	1.320
S9	NA	NA	NA	NA	NA	NA	NA	NA	NA
S6	0.000	0.00	0.000	0.000	NA	0.000	0.887	1.070	1.060
S2	1.050	1.09	0.243	0.942	NA	0.887	1.020	0.996	0.987
S1	0.472	0.87	1.090	0.783	NA	1.070	0.996	1.010	0.992
S3	1.550	1.08	0.717	1.320	NA	1.060	0.987	0.992	1.020

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

27

174

clusters connected through mates:

Cluster	Number of shared read pairs	k

27	233	0.183
147	13	0.0155
1640	5	0.0123
46	4	0.00305
1540	4	0.00983
108	3	0.0037
3690	3	0.00743
7920	3	0.00744
16700	3	0.00745
17300	3	0.00745
38	2	0.0014
42	2	0.00204
64	2	0.00163
168	2	0.00283
1260	2	0.0049
1920	2	0.00493
2680	2	0.00493
3080	2	0.00494
3100	2	0.00495
3720	2	0.00494
6060	2	0.00496
6830	2	0.00496
7350	2	0.00496
7370	2	0.00496
9610	2	0.00496
9730	2	0.00496
10700	2	0.00496
11000	2	0.00496
11300	2	0.00497
17500	2	0.00497
18100	2	0.00497
24900	2	0.00498
28200	2	0.00498
28400	2	0.00498
33400	2	0.00498
52300	2	0.00498
52300	2	0.00498
56400	2	0.00498
60800	2	0.00498
7	1	0.000544
23	1	0.000653
57	1	0.000833
77	1	0.00156
85	1	0.0011
110	1	0.000966
127	1	0.00184
188	1	0.0019
189	1	0.00188
365	1	0.00233
1040	1	0.00243
1350	1	0.00246
1350	1	0.00245
1820	1	0.00247
2050	1	0.00246
2210	1	0.00247
4020	1	0.00248
4220	1	0.00248
5460	1	0.00248
5800	1	0.00248
5870	1	0.00248
7080	1	0.00248
7170	1	0.00248
8190	1	0.00248
8580	1	0.00248
9070	1	0.00248
9850	1	0.00248
10000	1	0.00249
10100	1	0.00248
10200	1	0.00248
10400	1	0.00249
13200	1	0.00249
14000	1	0.00248
14200	1	0.00248
17100	1	0.00248
17800	1	0.00248
18500	1	0.00248
18900	1	0.00248
21400	1	0.00249
22400	1	0.00249
25900	1	0.00249
25900	1	0.00249
27100	1	0.00249
29100	1	0.00249
29200	1	0.00249
31400	1	0.00249
31600	1	0.00249
34300	1	0.00249
34700	1	0.00249
36500	1	0.00249
37000	1	0.00249
38200	1	0.00249
38800	1	0.00249
40600	1	0.00249
43800	1	0.00249
44400	1	0.00249
45300	1	0.00249
46700	1	0.00249
48000	1	0.00249
48500	1	0.00249
48700	1	0.00249
49500	1	0.00249
51900	1	0.00249
52100	1	0.00249
52700	1	0.00249
52800	1	0.00249
59200	1	0.00249
60500	1	0.00249
61500	1	0.00249
68300	1	0.00249
68900	1	0.00249
70200	1	0.00249

CL153 ----> CL27

No. of shared pairs: :233

CL153 ----> CL147

No. of shared pairs: :13