Cluster no. 152

Cluster no. 152

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Cluster is part of supercluster: 15

Cluster characteristics:

size	2019
size_real	2019
ecount	17006
supercluster	15
annotations_summary
pair_completeness	0.471574344023324
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.000495294700346706
satellite_probability	3.54668226065428e-21
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	0
S5	6
S4	3
S7	3
S9	3
S6	4
S2	703
S1	651
S3	646

comparative analysis - number of edges between species:

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	0	0.0	0.0	0.0	0.0	0.0	0.0	0	0.0
S5	0	0.0	0.0	0.0	0.0	0.5	32.5	31	16.5
S4	0	0.0	0.0	0.0	0.5	0.0	5.0	7	5.5
S7	0	0.0	0.0	0.0	0.0	0.5	2.5	5	5.5
S9	0	0.0	0.5	0.0	0.0	0.0	25.5	19	19.5
S6	0	0.5	0.0	0.5	0.0	0.0	19.0	22	13.0
S2	0	32.5	5.0	2.5	25.5	19.0	2270.0	2010	1730.0
S1	0	31.0	7.0	5.0	19.0	22.0	2010.0	1950	1670.0
S3	0	16.5	5.5	5.5	19.5	13.0	1730.0	1670	1510.0

comparative analysis - observed/expected number of edges between species

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	NA	NA	NA	NA	NA	NA	NA	NA	NA
S5	NA	0.000	0.000	0.000	0.000	1.920	1.130	1.150	0.702
S4	NA	0.000	0.000	0.000	7.320	0.000	0.775	1.160	1.050
S7	NA	0.000	0.000	0.000	0.000	11.500	0.517	1.100	1.390
S9	NA	0.000	7.320	0.000	0.000	0.000	1.100	0.877	1.030
S6	NA	1.920	0.000	11.500	0.000	0.000	0.964	1.190	0.809
S2	NA	1.130	0.775	0.517	1.100	0.964	1.040	0.983	0.972
S1	NA	1.150	1.160	1.100	0.877	1.190	0.983	1.010	1.000
S3	NA	0.702	1.050	1.390	1.030	0.809	0.972	1.000	1.040

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

23	57
116	4
140	1

clusters connected through mates:

Cluster	Number of shared read pairs	k

23	161	0.108
116	52	0.0739
140	27	0.0335
110	18	0.0181
436	17	0.0443
961	7	0.019
8700	4	0.011
7	3	0.00167
284	3	0.00763
2150	3	0.00824
5290	3	0.00821
8240	3	0.00823
13200	3	0.00824
13900	3	0.00824
17800	3	0.00824
57	2	0.00172
1780	2	0.00542
3160	2	0.00547
6060	2	0.00548
6370	2	0.00548
10300	2	0.0055
12000	2	0.00549
14100	2	0.00549
16200	2	0.00549
17900	2	0.00549
17900	2	0.00549
18200	2	0.00549
18400	2	0.00549
22400	2	0.0055
22900	2	0.0055
23200	2	0.0055
23300	2	0.0055
34600	2	0.0055
37200	2	0.0055
42900	2	0.0055
50400	2	0.0055
60300	2	0.0055
63100	2	0.0055
67800	2	0.0055
42	1	0.00106
46	1	0.000785
58	1	0.00107
98	1	0.00129
113	1	0.00134
125	1	0.00118
137	1	0.00201
148	1	0.00136
196	1	0.00193
365	1	0.00255
865	1	0.00268
880	1	0.00271
3050	1	0.00273
3140	1	0.00273
4000	1	0.00275
4480	1	0.00274
6650	1	0.00275
7510	1	0.00274
8020	1	0.00274
8890	1	0.00274
8940	1	0.00274
10800	1	0.00274
12000	1	0.00275
13400	1	0.00275
13500	1	0.00275
14900	1	0.00275
16700	1	0.00275
16800	1	0.00275
17800	1	0.00275
25200	1	0.00275
27400	1	0.00275
27500	1	0.00275
29100	1	0.00275
29500	1	0.00275
29700	1	0.00275
30800	1	0.00275
31700	1	0.00275
32000	1	0.00275
32300	1	0.00275
35100	1	0.00275
45300	1	0.00275
46800	1	0.00275
47200	1	0.00275
47500	1	0.00275
51300	1	0.00275
51600	1	0.00275
59800	1	0.00275
60100	1	0.00275
64600	1	0.00275
66400	1	0.00275
69000	1	0.00275
70900	1	0.00275

CL152 ----> CL23

No. of shared pairs: :161

CL152 ----> CL116

No. of shared pairs: :52

CL152 ----> CL140

No. of shared pairs: :27

CL152 ----> CL110

No. of shared pairs: :18

CL152 ----> CL436

No. of shared pairs: :17