Cluster no. 151

Cluster no. 151

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Cluster is part of supercluster: 4

Cluster characteristics:

size	2036
size_real	2036
ecount	86485
supercluster	4
annotations_summary	0.64% organelle/mitochondria
pair_completeness	0.407049067035245
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.0702357563850688
satellite_probability	3.72639031163708e-17
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	0
S5	699
S4	633
S7	2
S9	3
S6	699
S2	0
S1	0
S3	0

comparative analysis - number of edges between species:

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	0	0.0	0.0	0.0	0.0	0.0	0	0	0
S5	0	10300.0	9650.0	51.0	55.5	9870.0	0	0	0
S4	0	9650.0	8840.0	47.5	50.5	9200.0	0	0	0
S7	0	51.0	47.5	0.0	0.5	49.0	0	0	0
S9	0	55.5	50.5	0.5	0.0	38.5	0	0	0
S6	0	9870.0	9200.0	49.0	38.5	9290.0	0	0	0
S2	0	0.0	0.0	0.0	0.0	0.0	0	0	0
S1	0	0.0	0.0	0.0	0.0	0.0	0	0	0
S3	0	0.0	0.0	0.0	0.0	0.0	0	0	0

comparative analysis - observed/expected number of edges between species

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	NA	NA	NA	NA	NA	NA	NA	NA	NA
S5	NA	0.995	1.000	0.995	1.110	1.000	NA	NA	NA
S4	NA	1.000	0.990	0.999	1.080	1.010	NA	NA	NA
S7	NA	0.995	0.999	0.000	2.020	1.010	NA	NA	NA
S9	NA	1.110	1.080	2.020	0.000	0.807	NA	NA	NA
S6	NA	1.000	1.010	1.010	0.807	0.993	NA	NA	NA
S2	NA	NA	NA	NA	NA	NA	NA	NA	NA
S1	NA	NA	NA	NA	NA	NA	NA	NA	NA
S3	NA	NA	NA	NA	NA	NA	NA	NA	NA

protein domains:

protein domains:

Reads annotation summary

cl_string domain Freq proportion

mitochondria mitochondria 13 0.0064

clusters with similarity:

Cluster	Number of similarity hits

84	564
90	65
80	57
13	49
37	12
3	3
1	1

clusters connected through mates:

Cluster	Number of shared read pairs	k

84	260	0.221
90	202	0.184
13	80	0.041
37	29	0.0248
80	26	0.0222
3	14	0.00431
1150	9	0.0207
1	5	0.00233
67	5	0.00389
2010	4	0.0092
29	2	0.00136
118	2	0.00228
1230	2	0.0046
1850	2	0.0046
7870	2	0.00464
59300	2	0.00465
6	1	0.000326
10	1	0.000498
14	1	0.000491
39	1	0.000721
49	1	0.000508
61	1	0.00079
76	1	0.00103
81	1	0.00125
86	1	0.00108
220	1	0.00186
3480	1	0.00231
5570	1	0.00232
8390	1	0.00232
10100	1	0.00232
14400	1	0.00232
16000	1	0.00233

CL151 ----> CL84

No. of shared pairs: :260

CL151 ----> CL90

No. of shared pairs: :202

CL151 ----> CL13

No. of shared pairs: :80

CL151 ----> CL37

No. of shared pairs: :29

CL151 ----> CL80

No. of shared pairs: :26

CL151 ----> CL3

No. of shared pairs: :14