Cluster no. 109

Cluster no. 109

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Cluster is part of supercluster: 47

Cluster characteristics:

size	3034
size_real	3034
ecount	54569
supercluster	47
annotations_summary
pair_completeness	0.533097524002021
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.0016479894528675
satellite_probability	1.86264069827155e-21
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S8	1
S5	1010
S4	1020
S7	1
S9	2
S6	992
S2	5
S1	0
S3	0

comparative analysis - number of edges between species:

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	0.0	5.5	3.0	0.0	0.0	6.0	0.0	0	0
S5	5.5	6320.0	6490.0	0.5	5.0	5740.0	41.5	0	0
S4	3.0	6490.0	6510.0	1.5	3.5	5810.0	40.0	0	0
S7	0.0	0.5	1.5	0.0	0.0	1.0	0.0	0	0
S9	0.0	5.0	3.5	0.0	1.0	4.0	0.0	0	0
S6	6.0	5740.0	5810.0	1.0	4.0	5370.0	30.5	0	0
S2	0.0	41.5	40.0	0.0	0.0	30.5	1.0	0	0
S1	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0	0
S3	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0	0

comparative analysis - observed/expected number of edges between species

	S8	S5	S4	S7	S9	S6	S2	S1	S3
S8	0.000	1.110	0.599	0.000	0.000	1.330	0.000	NA	NA
S5	1.110	0.996	1.010	0.489	1.090	0.993	1.080	NA	NA
S4	0.599	1.010	0.999	1.450	0.750	0.991	1.020	NA	NA
S7	0.000	0.489	1.450	0.000	0.000	1.070	0.000	NA	NA
S9	0.000	1.090	0.750	0.000	299.000	0.953	0.000	NA	NA
S6	1.330	0.993	0.991	1.070	0.953	1.020	0.868	NA	NA
S2	0.000	1.080	1.020	0.000	0.000	0.868	4.270	NA	NA
S1	NA	NA	NA	NA	NA	NA	NA	NA	NA
S3	NA	NA	NA	NA	NA	NA	NA	NA	NA

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

10	978
19	648
20	599
49	527
72	66
25	59
45	52
47	52
161	11
220	5
231	2
95	1

clusters connected through mates:

Cluster	Number of shared read pairs	k

47	121	0.0857
19	104	0.0479
10	95	0.0465
20	73	0.0531
49	64	0.032
25	47	0.0387
72	24	0.0214
45	19	0.01
161	14	0.0168
15	7	0.00256
14	6	0.0029
220	4	0.00702
3	3	0.000914
231	3	0.00526
567	3	0.00627
7330	3	0.00646
2	2	0.000996
6	2	0.000644
34	2	0.00122
48	2	0.00139
87	2	0.00185
95	2	0.00198
236	2	0.00364
252	2	0.00369
1770	2	0.0043
3120	2	0.0043
4170	2	0.0043
11500	2	0.00431
14700	2	0.00431
21100	2	0.00432
33300	2	0.00432
35000	2	0.00432
35	1	0.000695
43	1	0.000582
67	1	0.000759
70	1	0.00127
71	1	0.000719
80	1	0.000832
82	1	0.000914
90	1	0.000883
100	1	0.00112
123	1	0.000967
145	1	0.00169
164	1	0.00197
237	1	0.00187
350	1	0.00209
368	1	0.00198
396	1	0.00205
515	1	0.00213
646	1	0.00211
1840	1	0.00215
2320	1	0.00214
2780	1	0.00214
3570	1	0.00215
4190	1	0.00216
4270	1	0.00215
4430	1	0.00215
5050	1	0.00215
5390	1	0.00216
7570	1	0.00216
10900	1	0.00216
11000	1	0.00216
11300	1	0.00216
12200	1	0.00216
13000	1	0.00216
13700	1	0.00216
13700	1	0.00216
14500	1	0.00216
16000	1	0.00216
16500	1	0.00216
16900	1	0.00216
18400	1	0.00216
18400	1	0.00216
19100	1	0.00216
23100	1	0.00216
24900	1	0.00216
29200	1	0.00216
32600	1	0.00216
34500	1	0.00216
34900	1	0.00216
40500	1	0.00216
42600	1	0.00216
43900	1	0.00216
48600	1	0.00216
50300	1	0.00216
64300	1	0.00216
64800	1	0.00216
65300	1	0.00216
65800	1	0.00216
68200	1	0.00216
69900	1	0.00216

CL109 ----> CL47

No. of shared pairs: :121

CL109 ----> CL19

No. of shared pairs: :104

CL109 ----> CL10

No. of shared pairs: :95

CL109 ----> CL20

No. of shared pairs: :73

CL109 ----> CL49

No. of shared pairs: :64

CL109 ----> CL25

No. of shared pairs: :47

CL109 ----> CL72

No. of shared pairs: :24

CL109 ----> CL45

No. of shared pairs: :19

CL109 ----> CL161

No. of shared pairs: :14