Cluster no. 44

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Cluster is part of supercluster: 1

Cluster characteristics:

size 6315
size_real 6315
ecount 440436
supercluster 1
annotations_summary
pair_completeness 0.573635684026913
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00158353127474268
satellite_probability 1.13992396794032e-21
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S8 4
S5 2070
S4 2120
S7 9
S9 2
S6 2100
S2 9
S1 5
S3 5
comparative analysis - number of edges between species:
S8 S5 S4 S7 S9 S6 S2 S1 S3
S8 1.0 30 48 0.5 0 39.5 0.0 0.0 0.5
S5 30.0 48100 48200 224.0 18 48500.0 266.0 126.0 97.0
S4 48.0 48200 48800 241.0 21 48500.0 244.0 103.0 86.0
S7 0.5 224 241 0.0 0 250.0 1.5 0.5 0.0
S9 0.0 18 21 0.0 0 19.0 0.0 0.0 0.0
S6 39.5 48500 48500 250.0 19 48800.0 280.0 115.0 75.0
S2 0.0 266 244 1.5 0 280.0 4.0 0.5 0.0
S1 0.0 126 103 0.5 0 115.0 0.5 0.0 0.5
S3 0.5 97 86 0.0 0 75.0 0.0 0.5 0.0
comparative analysis - observed/expected number of edges between species
S8 S5 S4 S7 S9 S6 S2 S1 S3
S8 30.800 0.760 1.210 2.570 0.000 0.994 0.000 0.000 7.12
S5 0.760 1.000 0.998 0.947 0.940 1.000 1.010 1.100 1.13
S4 1.210 0.998 1.010 1.010 1.090 0.997 0.924 0.900 1.00
S7 2.570 0.947 1.010 0.000 0.000 1.050 1.160 0.890 0.00
S9 0.000 0.940 1.090 0.000 0.000 0.985 0.000 0.000 0.00
S6 0.994 1.000 0.997 1.050 0.985 1.000 1.060 1.000 0.87
S2 0.000 1.010 0.924 1.160 0.000 1.060 2.780 0.802 0.00
S1 0.000 1.100 0.900 0.890 0.000 1.000 0.802 0.000 2.46
S3 7.120 1.130 1.000 0.000 0.000 0.870 0.000 2.460 0.00

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
2 5090
26 33
185 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
2 834 0.347
26 78 0.0438
67 42 0.0245
48 9 0.00492
833 8 0.00923
1060 8 0.00925
3 5 0.00136
1200 5 0.00581
6180 5 0.00583
1220 4 0.00463
3090 4 0.00465
62 3 0.00235
6930 3 0.0035
13700 3 0.0035
39 2 0.0011
45 2 0.000875
52 2 0.00142
80 2 0.00125
84 2 0.00125
90 2 0.00131
185 2 0.00177
2250 2 0.00233
3790 2 0.00233
4110 2 0.00233
5380 2 0.00233
6100 2 0.00233
6410 2 0.00233
7500 2 0.00233
8560 2 0.00233
9920 2 0.00234
10200 2 0.00233
10900 2 0.00234
12100 2 0.00233
12700 2 0.00233
13700 2 0.00233
15800 2 0.00233
19100 2 0.00233
19700 2 0.00233
21300 2 0.00234
23500 2 0.00234
26700 2 0.00234
29800 2 0.00234
31500 2 0.00234
33300 2 0.00234
37300 2 0.00234
40600 2 0.00234
41200 2 0.00234
45100 2 0.00234
45400 2 0.00234
46900 2 0.00234
48800 2 0.00234
56600 2 0.00234
58800 2 0.00234
67300 2 0.00234
69700 2 0.00234
1 1 0.000389
4 1 0.000408
14 1 0.000406
20 1 0.000566
29 1 0.000528
33 1 0.000383
35 1 0.000546
37 1 0.000626
41 1 0.000692
43 1 0.000473
55 1 0.000636
60 1 0.000544
65 1 0.000794
70 1 0.000849
86 1 0.000737
87 1 0.000677
95 1 0.000713
97 1 0.000966
117 1 0.000817
220 1 0.00104
271 1 0.00108
368 1 0.00111
369 1 0.00112
743 1 0.00116
1410 1 0.00116
2540 1 0.00116
2730 1 0.00116
2940 1 0.00117
3940 1 0.00117
4100 1 0.00116
4230 1 0.00116
4320 1 0.00117
5240 1 0.00116
5780 1 0.00117
6220 1 0.00117
6550 1 0.00117
6700 1 0.00117
6980 1 0.00117
7440 1 0.00117
7770 1 0.00117
8040 1 0.00117
8530 1 0.00117
9030 1 0.00117
9400 1 0.00117
9590 1 0.00117
10100 1 0.00117
10200 1 0.00117
10300 1 0.00117
10800 1 0.00117
11300 1 0.00117
11700 1 0.00117
12200 1 0.00117
12500 1 0.00117
13600 1 0.00117
13600 1 0.00117
13700 1 0.00117
13800 1 0.00117
14300 1 0.00117
15100 1 0.00117
15100 1 0.00117
15500 1 0.00117
15700 1 0.00117
16000 1 0.00117
17600 1 0.00117
18100 1 0.00117
18200 1 0.00117
18600 1 0.00117
18700 1 0.00117
18700 1 0.00117
19300 1 0.00117
19300 1 0.00117
19300 1 0.00117
19400 1 0.00117
19700 1 0.00117
19700 1 0.00117
19900 1 0.00117
20400 1 0.00117
20800 1 0.00117
20800 1 0.00117
21900 1 0.00117
22000 1 0.00117
22600 1 0.00117
24200 1 0.00117
24700 1 0.00117
25700 1 0.00117
26000 1 0.00117
26500 1 0.00117
26600 1 0.00117
28100 1 0.00117
28200 1 0.00117
29700 1 0.00117
31200 1 0.00117
31200 1 0.00117
31900 1 0.00117
32400 1 0.00117
33000 1 0.00117
34000 1 0.00117
37800 1 0.00117
38600 1 0.00117
40200 1 0.00117
40700 1 0.00117
41200 1 0.00117
41600 1 0.00117
41800 1 0.00117
42200 1 0.00117
42700 1 0.00117
43100 1 0.00117
43800 1 0.00117
44200 1 0.00117
44200 1 0.00117
44500 1 0.00117
45200 1 0.00117
48500 1 0.00117
50700 1 0.00117
54100 1 0.00117
54600 1 0.00117
54900 1 0.00117
55400 1 0.00117
56700 1 0.00117
60500 1 0.00117
65400 1 0.00117
66100 1 0.00117
66300 1 0.00117
68400 1 0.00117
68800 1 0.00117

CL44 ----> CL2

image

No. of shared pairs: :834

CL44 ----> CL26

image

No. of shared pairs: :78

CL44 ----> CL67

image

No. of shared pairs: :42