| size | 9410 |
| size_real | 9410 |
| ecount | 225106 |
| supercluster | 3 |
| annotations_summary | 0.23% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-GAG 0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT 0.01% organelle/mitochondria 0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-RT 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT |
| pair_completeness | 0.595997286295794 |
| pbs_score | None |
| TR_score | None |
| TR_monomer_length | None |
| loop_index | 0.0164718384697131 |
| satellite_probability | 5.09609701897237e-20 |
| consensus | None |
| TAREAN_annotation | Other |
| orientation_score | 1 |
| Species | Read count |
|---|---|
| S8 | 3040 |
| S5 | 10 |
| S4 | 16 |
| S7 | 3170 |
| S9 | 3120 |
| S6 | 17 |
| S2 | 13 |
| S1 | 13 |
| S3 | 16 |
| S8 | S5 | S4 | S7 | S9 | S6 | S2 | S1 | S3 | |
|---|---|---|---|---|---|---|---|---|---|
| S8 | 24700 | 77.0 | 158.0 | 24100 | 25000.0 | 155.0 | 35 | 115.0 | 156.0 |
| S5 | 77 | 4.0 | 0.0 | 75 | 66.5 | 1.0 | 0 | 1.5 | 0.5 |
| S4 | 158 | 0.0 | 1.0 | 144 | 168.0 | 1.0 | 0 | 0.5 | 0.5 |
| S7 | 24100 | 75.0 | 144.0 | 24000 | 24400.0 | 116.0 | 24 | 93.0 | 146.0 |
| S9 | 25000 | 66.5 | 168.0 | 24400 | 25300.0 | 137.0 | 31 | 95.5 | 149.0 |
| S6 | 155 | 1.0 | 1.0 | 116 | 137.0 | 3.0 | 0 | 1.5 | 1.5 |
| S2 | 35 | 0.0 | 0.0 | 24 | 31.0 | 0.0 | 1 | 0.0 | 0.0 |
| S1 | 115 | 1.5 | 0.5 | 93 | 95.5 | 1.5 | 0 | 1.0 | 0.5 |
| S3 | 156 | 0.5 | 0.5 | 146 | 149.0 | 1.5 | 0 | 0.5 | 3.0 |
| S8 | S5 | S4 | S7 | S9 | S6 | S2 | S1 | S3 | |
|---|---|---|---|---|---|---|---|---|---|
| S8 | 0.999 | 1.03 | 1.010 | 0.997 | 1.000 | 1.130 | 1.160 | 1.130 | 1.030 |
| S5 | 1.030 | 17.70 | 0.000 | 1.020 | 0.880 | 2.400 | 0.000 | 4.850 | 1.090 |
| S4 | 1.010 | 0.00 | 1.000 | 0.939 | 1.060 | 1.140 | 0.000 | 0.771 | 0.520 |
| S7 | 0.997 | 1.02 | 0.939 | 1.010 | 0.995 | 0.855 | 0.811 | 0.927 | 0.983 |
| S9 | 1.000 | 0.88 | 1.060 | 0.995 | 1.000 | 0.984 | 1.020 | 0.924 | 0.973 |
| S6 | 1.130 | 2.40 | 1.140 | 0.855 | 0.984 | 3.910 | 0.000 | 2.630 | 1.780 |
| S2 | 1.160 | 0.00 | 0.000 | 0.811 | 1.020 | 0.000 | 27.200 | 0.000 | 0.000 |
| S1 | 1.130 | 4.85 | 0.771 | 0.927 | 0.924 | 2.630 | 0.000 | 2.370 | 0.798 |
| S3 | 1.030 | 1.09 | 0.520 | 0.983 | 0.973 | 1.780 | 0.000 | 0.798 | 3.230 |
protein domains:
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CL12 ----> CL102
No. of shared pairs: :245
CL12 ----> CL166
No. of shared pairs: :156
CL12 ----> CL114
No. of shared pairs: :152
CL12 ----> CL103
No. of shared pairs: :135
CL12 ----> CL75
No. of shared pairs: :126
CL12 ----> CL79
No. of shared pairs: :85
CL12 ----> CL32
No. of shared pairs: :79
CL12 ----> CL9
No. of shared pairs: :75
CL12 ----> CL221
No. of shared pairs: :65
CL12 ----> CL4
No. of shared pairs: :36
CL12 ----> CL213
No. of shared pairs: :32
CL12 ----> CL53
No. of shared pairs: :26
CL12 ----> CL203
No. of shared pairs: :25
CL12 ----> CL263
No. of shared pairs: :21
CL12 ----> CL11
No. of shared pairs: :19
CL12 ----> CL8
No. of shared pairs: :15
CL12 ----> CL5
No. of shared pairs: :14
CL12 ----> CL426
No. of shared pairs: :13
CL12 ----> CL22
No. of shared pairs: :12
CL12 ----> CL40
No. of shared pairs: :12
CL12 ----> CL387
No. of shared pairs: :12
CL12 ----> CL372
No. of shared pairs: :10