Cluster no. 188

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Cluster is part of supercluster: 132

Cluster characteristics:

size 75
size_real 75
ecount 339
supercluster 132
annotations_summary 90.67% organelle/plastid
1.33% organelle/mitochondria
pair_completeness 0.704545454545455
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.0133333333333333
satellite_probability 1.39558417663517e-21
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S8 32
S9 15
S7 28
comparative analysis - number of edges between species:
S8 S9 S7
S8 63 30 57
S9 30 8 21
S7 57 21 52
comparative analysis - observed/expected number of edges between species
S8 S9 S7
S8 0.949 1.150 0.991
S9 1.150 0.779 0.928
S7 0.991 0.928 1.040

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
mitochondria mitochondria 1 0.013
plastid plastid 68 0.907

clusters connected through mates:

Cluster Number of shared
read pairs
k
963 5 0.455
487 4 0.308
227 1 0.08
700 1 0.1