Cluster no. 187

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Cluster is part of supercluster: 131

Cluster characteristics:

size 75
size_real 75
ecount 311
supercluster 131
annotations_summary
pair_completeness 0.209677419354839
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.0133333333333333
satellite_probability 9.58585004034497e-21
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S8 24
S9 25
S7 26
comparative analysis - number of edges between species:
S8 S9 S7
S8 46.0 29.5 37.5
S9 29.5 35.0 33.0
S7 37.5 33.0 30.0
comparative analysis - observed/expected number of edges between species
S8 S9 S7
S8 1.120 0.833 1.030
S9 0.833 1.150 1.050
S7 1.030 1.050 0.924

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
15 15 0.0138
1680 3 0.107
1 1 0.000367
12 1 0.00107
23 1 0.00103
701 1 0.0323
1150 1 0.0357
5180 1 0.0385
11800 1 0.0392
16200 1 0.0392

CL187 ----> CL15

image

No. of shared pairs: :15