Cluster no. 186
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Cluster is part of supercluster: 130
Cluster characteristics:
| size |
75 |
| size_real |
75 |
| ecount |
211 |
| supercluster |
130 |
| annotations_summary |
|
| pair_completeness |
0.442307692307692 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0533333333333333 |
| satellite_probability |
2.38243064781418e-18 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
17 |
| S9 |
26 |
| S7 |
32 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
12 |
16 |
23 |
| S9 |
16 |
27 |
32 |
| S7 |
23 |
32 |
30 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
0.973 |
0.883 |
1.120 |
| S9 |
0.883 |
1.010 |
1.060 |
| S7 |
1.120 |
1.060 |
0.876 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 17 |
6 |
0.00678 |
| 836 |
5 |
0.27 |
| 932 |
5 |
0.263 |
| 41 |
4 |
0.00408 |
| 6760 |
2 |
0.125 |
| 15 |
1 |
0.000929 |
| 20 |
1 |
0.000528 |
| 3770 |
1 |
0.0606 |
|