Cluster no. 184
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Cluster is part of supercluster: 128
Cluster characteristics:
| size |
77 |
| size_real |
77 |
| ecount |
477 |
| supercluster |
128 |
| annotations_summary |
|
| pair_completeness |
0.425925925925926 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.012987012987013 |
| satellite_probability |
1.0041894271145e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
13 |
| S9 |
32 |
| S7 |
32 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
12 |
34.0 |
32.0 |
| S9 |
34 |
80.0 |
84.5 |
| S7 |
32 |
84.5 |
84.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
0.941 |
1.050 |
0.976 |
| S9 |
1.050 |
0.968 |
1.010 |
| S7 |
0.976 |
1.010 |
0.997 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 41 |
13 |
0.0133 |
| 201 |
6 |
0.235 |
| 101 |
3 |
0.0253 |
| 15 |
1 |
0.000929 |
| 900 |
1 |
0.0526 |
| 16100 |
1 |
0.0606 |
| 19400 |
1 |
0.0606 |
|
CL184 ----> CL41
No. of shared pairs: :13