Cluster no. 183
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Cluster is part of supercluster: 127
Cluster characteristics:
| size |
77 |
| size_real |
77 |
| ecount |
203 |
| supercluster |
127 |
| annotations_summary |
|
| pair_completeness |
0.166666666666667 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.051948051948052 |
| satellite_probability |
2.73547994799344e-18 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
31 |
| S9 |
24 |
| S7 |
22 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
39.0 |
25.5 |
23.5 |
| S9 |
25.5 |
20.0 |
17.5 |
| S7 |
23.5 |
17.5 |
11.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
1.020 |
0.934 |
1.040 |
| S9 |
0.934 |
1.020 |
1.080 |
| S7 |
1.040 |
1.080 |
0.826 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 950 |
6 |
0.188 |
| 548 |
4 |
0.11 |
| 1080 |
3 |
0.0952 |
| 13 |
2 |
0.000874 |
| 13200 |
2 |
0.0702 |
| 12 |
1 |
0.00106 |
| 16 |
1 |
0.000491 |
| 1160 |
1 |
0.0312 |
| 5510 |
1 |
0.0345 |
| 15400 |
1 |
0.0351 |
| 20700 |
1 |
0.0351 |
| 22500 |
1 |
0.0351 |
| 24200 |
1 |
0.0351 |
|