Cluster no. 180
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Cluster is part of supercluster: 124
Cluster characteristics:
| size |
79 |
| size_real |
79 |
| ecount |
243 |
| supercluster |
124 |
| annotations_summary |
|
| pair_completeness |
0.462962962962963 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.10126582278481 |
| satellite_probability |
1.92325708281545e-15 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
29 |
| S9 |
22 |
| S7 |
28 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
35.0 |
24.5 |
32.0 |
| S9 |
24.5 |
12.0 |
27.5 |
| S7 |
32.0 |
27.5 |
28.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
1.020 |
1.020 |
0.971 |
| S9 |
1.020 |
0.712 |
1.190 |
| S7 |
0.971 |
1.190 |
0.889 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 113 |
8 |
0.152 |
| 264 |
7 |
0.246 |
| 41 |
6 |
0.00612 |
| 148 |
1 |
0.0312 |
| 1200 |
1 |
0.0526 |
| 1790 |
1 |
0.0645 |
|