Cluster no. 177
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Cluster is part of supercluster: 121
Cluster characteristics:
| size |
82 |
| size_real |
82 |
| ecount |
241 |
| supercluster |
121 |
| annotations_summary |
|
| pair_completeness |
0.389830508474576 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0121951219512195 |
| satellite_probability |
1.11063897810074e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
33 |
| S9 |
24 |
| S7 |
25 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
38.0 |
25.5 |
33.5 |
| S9 |
25.5 |
16.0 |
19.0 |
| S7 |
33.5 |
19.0 |
31.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
0.973 |
1.050 |
0.997 |
| S9 |
1.050 |
1.050 |
0.906 |
| S7 |
0.997 |
0.906 |
1.070 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 549 |
7 |
0.28 |
| 5000 |
3 |
0.154 |
| 1 |
2 |
0.000736 |
| 4 |
1 |
0.000403 |
| 421 |
1 |
0.037 |
| 950 |
1 |
0.0444 |
| 1070 |
1 |
0.0455 |
| 3170 |
1 |
0.0526 |
| 15000 |
1 |
0.0526 |
| 22500 |
1 |
0.0526 |
|