Cluster no. 173
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Cluster is part of supercluster: 117
Cluster characteristics:
| size |
86 |
| size_real |
86 |
| ecount |
339 |
| supercluster |
117 |
| annotations_summary |
|
| pair_completeness |
0.622641509433962 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0116279069767442 |
| satellite_probability |
3.17876592687763e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
31 |
| S9 |
26 |
| S7 |
29 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
52.0 |
39.5 |
43.5 |
| S9 |
39.5 |
31.0 |
31.5 |
| S7 |
43.5 |
31.5 |
27.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
0.967 |
0.972 |
1.07 |
| S9 |
0.972 |
1.010 |
1.03 |
| S7 |
1.070 |
1.030 |
0.88 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 395 |
6 |
0.316 |
| 8160 |
2 |
0.182 |
| 16900 |
2 |
0.182 |
| 24300 |
1 |
0.0909 |
| 24300 |
1 |
0.0909 |
|