Cluster no. 166
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Cluster is part of supercluster: 110
Cluster characteristics:
| size |
95 |
| size_real |
95 |
| ecount |
207 |
| supercluster |
110 |
| annotations_summary |
|
| pair_completeness |
0.319444444444444 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.231578947368421 |
| satellite_probability |
1.60445145723925e-11 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
30 |
| S9 |
42 |
| S7 |
23 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
24.0 |
30.0 |
11.5 |
| S9 |
30.0 |
51.0 |
20.5 |
| S7 |
11.5 |
20.5 |
8.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
1.160 |
0.934 |
0.909 |
| S9 |
0.934 |
1.020 |
1.050 |
| S7 |
0.909 |
1.050 |
1.030 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 112 |
5 |
0.0637 |
| 386 |
3 |
0.0968 |
| 3280 |
3 |
0.113 |
| 2040 |
2 |
0.0727 |
| 24 |
1 |
0.000831 |
| 26 |
1 |
0.000565 |
| 41 |
1 |
0.00101 |
| 1960 |
1 |
0.0364 |
| 3070 |
1 |
0.0377 |
| 9410 |
1 |
0.0392 |
| 12000 |
1 |
0.0392 |
| 22500 |
1 |
0.0392 |
| 23200 |
1 |
0.0392 |
|