Cluster no. 165
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Cluster is part of supercluster: 109
Cluster characteristics:
| size |
95 |
| size_real |
95 |
| ecount |
260 |
| supercluster |
109 |
| annotations_summary |
|
| pair_completeness |
0.439393939393939 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.105263157894737 |
| satellite_probability |
5.0958988550974e-15 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
26 |
| S9 |
26 |
| S7 |
43 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
18.0 |
18.5 |
29.0 |
| S9 |
18.5 |
17.0 |
28.5 |
| S7 |
29.0 |
28.5 |
73.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
1.090 |
1.150 |
0.882 |
| S9 |
1.150 |
1.080 |
0.887 |
| S7 |
0.882 |
0.887 |
1.110 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 41 |
4 |
0.00407 |
| 1400 |
3 |
0.14 |
| 5980 |
3 |
0.15 |
| 1030 |
2 |
0.0851 |
| 3820 |
2 |
0.0976 |
| 4130 |
2 |
0.0976 |
| 12 |
1 |
0.00107 |
| 1410 |
1 |
0.0488 |
| 3210 |
1 |
0.0488 |
| 3230 |
1 |
0.0513 |
| 6790 |
1 |
0.05 |
| 10600 |
1 |
0.0513 |
| 21500 |
1 |
0.0513 |
| 24800 |
1 |
0.0513 |
|