Cluster no. 161

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Cluster is part of supercluster: 105

Cluster characteristics:

size 99
size_real 99
ecount 445
supercluster 105
annotations_summary 98.99% organelle/plastid
1.01% organelle/mitochondria
pair_completeness 0.8
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.0101010101010101
satellite_probability 3.7950125041552e-22
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S8 33
S9 30
S7 36
comparative analysis - number of edges between species:
S8 S9 S7
S8 52.0 53.0 52.5
S9 53.0 44.0 40.5
S7 52.5 40.5 57.0
comparative analysis - observed/expected number of edges between species
S8 S9 S7
S8 0.933 1.090 0.989
S9 1.090 1.040 0.874
S7 0.989 0.874 1.130

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
mitochondria mitochondria 1 0.01
plastid plastid 98 0.99

clusters connected through mates:

Cluster Number of shared
read pairs		 k
370 5 0.476
135 1 0.0625
723 1 0.118
13900 1 0.154