Cluster no. 158
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Cluster is part of supercluster: 102
Cluster characteristics:
| size |
104 |
| size_real |
104 |
| ecount |
377 |
| supercluster |
102 |
| annotations_summary |
|
| pair_completeness |
0.485714285714286 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00961538461538462 |
| satellite_probability |
7.87864394035015e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
39 |
| S9 |
34 |
| S7 |
31 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
54 |
47.0 |
37.0 |
| S9 |
47 |
41.0 |
41.5 |
| S7 |
37 |
41.5 |
31.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
1.070 |
0.991 |
0.923 |
| S9 |
0.991 |
0.922 |
1.100 |
| S7 |
0.923 |
1.100 |
0.975 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 2820 |
4 |
0.195 |
| 260 |
2 |
0.0889 |
| 11700 |
2 |
0.105 |
| 1 |
1 |
0.000368 |
| 23 |
1 |
0.00104 |
| 1510 |
1 |
0.0465 |
| 3740 |
1 |
0.0526 |
|