Cluster no. 153

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Cluster is part of supercluster: 97

Cluster characteristics:

size 109
size_real 109
ecount 394
supercluster 97
annotations_summary
pair_completeness 0.224719101123595
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00917431192660551
satellite_probability 9.91635870094047e-21
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S8 35
S9 35
S7 39
comparative analysis - number of edges between species:
S8 S9 S7
S8 44.0 30.5 52.0
S9 30.5 27.0 44.5
S7 52.0 44.5 69.0
comparative analysis - observed/expected number of edges between species
S8 S9 S7
S8 1.080 0.931 0.979
S9 0.931 1.020 1.040
S7 0.979 1.040 0.993

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
232 6 0.108
136 4 0.0825
1370 3 0.0779
374 2 0.0548
1900 2 0.0533
4540 2 0.0556
7070 2 0.0556
4 1 0.000401
7 1 0.00113
669 1 0.0253
1490 1 0.027
1750 1 0.0267
2840 1 0.0278
3200 1 0.0274
3750 1 0.0274
4130 1 0.0274
6390 1 0.0278
8740 1 0.0282
10400 1 0.0282
15700 1 0.0282
17000 1 0.0282
19200 1 0.0282
19700 1 0.0282
20200 1 0.0282
20500 1 0.0282
23500 1 0.0282
24600 1 0.0282