Cluster no. 152
Go back to cluster table
Cluster is part of supercluster: 96
Cluster characteristics:
| size |
112 |
| size_real |
112 |
| ecount |
226 |
| supercluster |
96 |
| annotations_summary |
|
| pair_completeness |
0.28735632183908 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00892857142857143 |
| satellite_probability |
1.1552035631474e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
49 |
| S9 |
33 |
| S7 |
30 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
46.0 |
24.5 |
32.0 |
| S9 |
24.5 |
11.0 |
17.5 |
| S7 |
32.0 |
17.5 |
21.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
0.99 |
1.020 |
1.000 |
| S9 |
1.02 |
0.885 |
1.060 |
| S7 |
1.00 |
1.060 |
0.955 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 13300 |
2 |
0.0625 |
| 24600 |
2 |
0.0625 |
| 61 |
1 |
0.00189 |
| 7810 |
1 |
0.0312 |
| 12000 |
1 |
0.0312 |
| 15400 |
1 |
0.0312 |
|