Cluster no. 148
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Cluster is part of supercluster: 92
Cluster characteristics:
| size |
119 |
| size_real |
119 |
| ecount |
1053 |
| supercluster |
92 |
| annotations_summary |
|
| pair_completeness |
0.545454545454545 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.210084033613445 |
| satellite_probability |
2.9900684237434e-12 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
46 |
| S9 |
40 |
| S7 |
33 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
189 |
128 |
141 |
| S9 |
128 |
67 |
87 |
| S7 |
141 |
87 |
84 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
0.947 |
1.040 |
1.040 |
| S9 |
1.040 |
0.884 |
1.040 |
| S7 |
1.040 |
1.040 |
0.909 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 642 |
7 |
0.292 |
| 113 |
6 |
0.108 |
| 201 |
4 |
0.145 |
| 2580 |
2 |
0.1 |
| 3260 |
2 |
0.103 |
| 4440 |
2 |
0.105 |
| 180 |
1 |
0.0312 |
| 264 |
1 |
0.0317 |
| 2650 |
1 |
0.05 |
| 7030 |
1 |
0.0526 |
| 10100 |
1 |
0.0541 |
| 20500 |
1 |
0.0541 |
|