Cluster no. 147
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Cluster is part of supercluster: 91
Cluster characteristics:
| size |
122 |
| size_real |
122 |
| ecount |
641 |
| supercluster |
91 |
| annotations_summary |
|
| pair_completeness |
0.196078431372549 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00819672131147541 |
| satellite_probability |
9.23843870857443e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
47 |
| S9 |
33 |
| S7 |
42 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
110 |
57.0 |
102.0 |
| S9 |
57 |
27.0 |
52.5 |
| S7 |
102 |
52.5 |
81.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
0.974 |
0.995 |
1.030 |
| S9 |
0.995 |
0.929 |
1.050 |
| S7 |
1.030 |
1.050 |
0.936 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 8 |
39 |
0.0258 |
| 2 |
21 |
0.0105 |
| 38 |
2 |
0.00222 |
| 15 |
1 |
0.000907 |
| 16 |
1 |
0.000488 |
| 29 |
1 |
0.000773 |
| 19200 |
1 |
0.0238 |
|
CL147 ----> CL8
No. of shared pairs: :39
CL147 ----> CL2
No. of shared pairs: :21