Cluster no. 146
Go back to cluster table
Cluster is part of supercluster: 90
Cluster characteristics:
| size |
123 |
| size_real |
123 |
| ecount |
281 |
| supercluster |
90 |
| annotations_summary |
|
| pair_completeness |
0.447058823529412 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.130081300813008 |
| satellite_probability |
2.18916926459579e-14 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
36 |
| S9 |
38 |
| S7 |
49 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
30 |
26.0 |
37.0 |
| S9 |
26 |
15.0 |
27.5 |
| S7 |
37 |
27.5 |
55.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
0.975 |
1.150 |
0.936 |
| S9 |
1.150 |
0.898 |
0.944 |
| S7 |
0.936 |
0.944 |
1.080 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 258 |
7 |
0.206 |
| 112 |
2 |
0.0258 |
| 6070 |
2 |
0.08 |
| 18300 |
2 |
0.0816 |
| 17 |
1 |
0.00112 |
| 41 |
1 |
0.00101 |
| 1240 |
1 |
0.0377 |
| 2130 |
1 |
0.0392 |
| 4710 |
1 |
0.0417 |
| 5610 |
1 |
0.0417 |
| 10800 |
1 |
0.0408 |
| 24200 |
1 |
0.0408 |
|