Cluster no. 141
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Cluster is part of supercluster: 86
Cluster characteristics:
| size |
133 |
| size_real |
133 |
| ecount |
273 |
| supercluster |
86 |
| annotations_summary |
|
| pair_completeness |
0.371134020618557 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0075187969924812 |
| satellite_probability |
1.14691457676211e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
37 |
| S9 |
51 |
| S7 |
45 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
20.0 |
34.5 |
20.0 |
| S9 |
34.5 |
35.0 |
41.5 |
| S7 |
20.0 |
41.5 |
26.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
0.984 |
1.140 |
0.838 |
| S9 |
1.140 |
0.776 |
1.170 |
| S7 |
0.838 |
1.170 |
0.927 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 572 |
2 |
0.0513 |
| 747 |
2 |
0.058 |
| 2460 |
2 |
0.0606 |
| 21 |
1 |
0.00146 |
| 36 |
1 |
0.00149 |
| 358 |
1 |
0.0253 |
| 913 |
1 |
0.0286 |
| 1790 |
1 |
0.0308 |
| 2880 |
1 |
0.0308 |
| 6560 |
1 |
0.0312 |
| 11200 |
1 |
0.0317 |
|