Cluster no. 140
Go back to cluster table
Cluster is part of supercluster: 85
Cluster characteristics:
| size |
134 |
| size_real |
134 |
| ecount |
380 |
| supercluster |
85 |
| annotations_summary |
|
| pair_completeness |
0.381443298969072 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00746268656716418 |
| satellite_probability |
1.1303462298218e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
38 |
| S9 |
55 |
| S7 |
41 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
24 |
25 |
35 |
| S9 |
25 |
72 |
55 |
| S7 |
35 |
55 |
54 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
1.290 |
0.744 |
1.100 |
| S9 |
0.744 |
1.180 |
0.955 |
| S7 |
1.100 |
0.955 |
0.990 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 37 |
3 |
0.00469 |
| 8010 |
2 |
0.0645 |
| 11900 |
2 |
0.0645 |
| 1060 |
1 |
0.0303 |
| 2150 |
1 |
0.0312 |
| 3280 |
1 |
0.0312 |
| 4020 |
1 |
0.0312 |
| 7390 |
1 |
0.0328 |
| 8370 |
1 |
0.0323 |
| 12300 |
1 |
0.0323 |
| 14900 |
1 |
0.0323 |
| 15600 |
1 |
0.0323 |
| 21900 |
1 |
0.0323 |
| 23900 |
1 |
0.0323 |
| 25700 |
1 |
0.0323 |
|