Cluster no. 139
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Cluster is part of supercluster: 84
Cluster characteristics:
| size |
138 |
| size_real |
138 |
| ecount |
555 |
| supercluster |
84 |
| annotations_summary |
|
| pair_completeness |
0.703703703703704 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0072463768115942 |
| satellite_probability |
1.39558417663517e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
52 |
| S9 |
45 |
| S7 |
41 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
77.0 |
71 |
60.5 |
| S9 |
71.0 |
69 |
46.0 |
| S7 |
60.5 |
46 |
54.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
0.983 |
1.020 |
1.000 |
| S9 |
1.020 |
1.110 |
0.855 |
| S7 |
1.000 |
0.855 |
1.160 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 474 |
6 |
0.293 |
| 461 |
3 |
0.167 |
| 5690 |
2 |
0.148 |
| 9 |
1 |
0.000476 |
| 12 |
1 |
0.00108 |
| 208 |
1 |
0.037 |
| 2690 |
1 |
0.0741 |
| 16300 |
1 |
0.0769 |
|