Cluster no. 136
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Cluster is part of supercluster: 81
Cluster characteristics:
| size |
146 |
| size_real |
146 |
| ecount |
985 |
| supercluster |
81 |
| annotations_summary |
|
| pair_completeness |
0.67816091954023 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00684931506849315 |
| satellite_probability |
1.74710246978928e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
55 |
| S9 |
53 |
| S7 |
38 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
133.0 |
138.0 |
95.5 |
| S9 |
138.0 |
132.0 |
96.5 |
| S7 |
95.5 |
96.5 |
60.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
0.975 |
1.010 |
1.020 |
| S9 |
1.010 |
0.968 |
1.030 |
| S7 |
1.020 |
1.030 |
0.931 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 4 |
8 |
0.00323 |
| 13 |
7 |
0.00308 |
| 153 |
4 |
0.0825 |
| 8180 |
2 |
0.133 |
| 41 |
1 |
0.00102 |
| 123 |
1 |
0.0179 |
| 23900 |
1 |
0.0667 |
|