Cluster no. 133
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Cluster is part of supercluster: 78
Cluster characteristics:
| size |
156 |
| size_real |
156 |
| ecount |
329 |
| supercluster |
78 |
| annotations_summary |
|
| pair_completeness |
0.190839694656489 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00641025641025641 |
| satellite_probability |
8.87680651322255e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
50 |
| S9 |
52 |
| S7 |
54 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
46.0 |
51.0 |
38.5 |
| S9 |
51.0 |
33.0 |
26.5 |
| S7 |
38.5 |
26.5 |
18.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
0.824 |
1.120 |
1.130 |
| S9 |
1.120 |
0.889 |
0.951 |
| S7 |
1.130 |
0.951 |
0.860 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 382 |
6 |
0.096 |
| 18 |
1 |
0.00097 |
| 4710 |
1 |
0.0183 |
| 4850 |
1 |
0.0183 |
| 5620 |
1 |
0.0183 |
| 9670 |
1 |
0.0185 |
| 13300 |
1 |
0.0185 |
| 14200 |
1 |
0.0185 |
| 15900 |
1 |
0.0185 |
|