Cluster no. 131
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Cluster is part of supercluster: 76
Cluster characteristics:
| size |
167 |
| size_real |
167 |
| ecount |
716 |
| supercluster |
76 |
| annotations_summary |
|
| pair_completeness |
0.380165289256198 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00598802395209581 |
| satellite_probability |
1.1303462298218e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S8 |
51 |
| S9 |
48 |
| S7 |
68 |
comparative analysis - number of edges between species:
|
S8 |
S9 |
S7 |
| S8 |
81.0 |
52.5 |
89.5 |
| S9 |
52.5 |
43.0 |
85.0 |
| S7 |
89.5 |
85.0 |
138.0 |
comparative analysis - observed/expected number of edges between species
|
S8 |
S9 |
S7 |
| S8 |
1.170 |
0.934 |
0.92 |
| S9 |
0.934 |
0.945 |
1.08 |
| S7 |
0.920 |
1.080 |
1.01 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 78 |
5 |
0.0208 |
| 1540 |
4 |
0.0976 |
| 2860 |
3 |
0.075 |
| 21800 |
2 |
0.0519 |
| 22200 |
2 |
0.0519 |
| 15 |
1 |
0.00091 |
| 16 |
1 |
0.000489 |
| 24 |
1 |
0.000822 |
| 36 |
1 |
0.00147 |
| 50 |
1 |
0.00379 |
| 332 |
1 |
0.0213 |
| 887 |
1 |
0.0247 |
| 1260 |
1 |
0.0241 |
| 10300 |
1 |
0.026 |
| 17100 |
1 |
0.026 |
| 18100 |
1 |
0.026 |
| 18500 |
1 |
0.026 |
| 22200 |
1 |
0.026 |
|