Cluster no. 124

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Cluster is part of supercluster: 69

Cluster characteristics:

size 191
size_real 191
ecount 1030
supercluster 69
annotations_summary 100.00% organelle/plastid
pair_completeness 0.80188679245283
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00523560209424084
satellite_probability 3.7950125041552e-22
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S8 55
S9 74
S7 62
comparative analysis - number of edges between species:
S8 S9 S7
S8 97 102 102
S9 102 160 124
S7 102 124 117
comparative analysis - observed/expected number of edges between species
S8 S9 S7
S8 1.100 0.904 1.020
S9 0.904 1.110 0.965
S7 1.020 0.965 1.020

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
plastid plastid 191 1

clusters connected through mates:

Cluster Number of shared
read pairs		 k
96 11 0.367
125 4 0.211
2 2 0.00101

CL124 ----> CL96

image

No. of shared pairs: :11