Cluster no. 123

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Cluster is part of supercluster: 68

Cluster characteristics:

size 196
size_real 196
ecount 508
supercluster 68
annotations_summary
pair_completeness 0.4
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00510204081632653
satellite_probability 1.08796458838458e-20
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S8 70
S9 63
S7 63
comparative analysis - number of edges between species:
S8 S9 S7
S8 71.0 59.0 54.5
S9 59.0 61.0 49.5
S7 54.5 49.5 50.0
comparative analysis - observed/expected number of edges between species
S8 S9 S7
S8 1.060 0.958 0.974
S9 0.958 1.080 0.963
S7 0.974 0.963 1.070

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
4 6 0.0024
20 4 0.00208
491 4 0.0816
381 3 0.0606
13 2 0.000868
18 2 0.00196
59 2 0.00253
2 1 0.000498
9 1 0.00047
22 1 0.00069
24 1 0.000819
27 1 0.000669
32 1 0.000645
40 1 0.00171
60 1 0.00276
80 1 0.00372
136 1 0.0179
582 1 0.0198
2970 1 0.0227
12500 1 0.0233