Cluster no. 120

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Cluster is part of supercluster: 65

Cluster characteristics:

size 202
size_real 202
ecount 5020
supercluster 65
annotations_summary
pair_completeness 0.87037037037037
pbs_score 0.0
TR_score 0.4346854040242734
TR_monomer_length 377.0
loop_index 0.95049504950495
satellite_probability 0.750832117026668
consensus 
ATAAGATCAAGAAAGTTTCAAAATATAAGTGAAACTTTGATGTTTGCATCGAATAAGTAGGTTTCTTGGTGCTCAAGTAA
TCAGGTAAAACACTGCCGCATGTTTGAAACTCTACCATTTCAAATACATATAACACTCATCATTAAATAATAGTGCTTTT
AAAAACACGTTTCGACTTTGGGAGTAGAATTTGCGTGAATAAGACGAAAAAGTTTTCAAATATTAGTAGAATATTCATAT
TTTCATATTGACCGAGCAGGTTGCTTAGTGACTAAGTAATCAGGTAAAACACTGCCGCATGTTTGCCATTCTACATTTTA
AAGCATCTATAACACTCATCATTTGCATATTACCGTTTGGACCCTGGATCCGCGCCA

  

  

    TAREAN_annotation
    Putative satellite (high confidence)
  

  

    orientation_score
    1
  

 


 
 comparative analysis:


  





 
 Comparative analysis - species read counts:



  

    Species
    Read count
  

   

    S8
    62
  

  

    S9
    72
  

  

    S7
    68
  

 


 
 comparative analysis - number of edges between species:



  

    
    S8
    S9
    S7
  

   

    S8
    428
    550
    532
  

  

    S9
    550
    642
    611
  

  

    S7
    532
    611
    563
  

 


 
 comparative analysis - observed/expected number of edges between species



  

    
    S8
    S9
    S7
  

   

    S8
    0.942
    1.010
    1.040
  

  

    S9
    1.010
    0.991
    0.997
  

  

    S7
    1.040
    0.997
    0.971
  

 


 
 protein domains:



No protein domains detected



protein domains:


  





 
 Reads annotation summary



No similarity hits to repeat databases found


 
 clusters connected through mates:



  

    
      




 

    Cluster
    Number of shared
 read pairs		
    k
  

      

   		
 

 

   
     

       




  

    1
    1
    0.00037
  

  

    13
    1
    0.000441
  

  

    18
    1
    0.00102
  

  

    24
    1
    0.000843
  

  

    61
    1
    0.00198