Cluster no. 110

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Cluster is part of supercluster: 55

Cluster characteristics:

size 295
size_real 295
ecount 1792
supercluster 55
annotations_summary 98.98% organelle/plastid
1.02% organelle/mitochondria
pair_completeness 0.832298136645963
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00338983050847458
satellite_probability 1.43574013326601e-23
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S8 99
S9 108
S7 88
comparative analysis - number of edges between species:
S8 S9 S7
S8 193 216 164
S9 216 237 200
S7 164 200 201
comparative analysis - observed/expected number of edges between species
S8 S9 S7
S8 1.050 1.040 0.909
S9 1.040 0.996 0.969
S7 0.909 0.969 1.130

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
mitochondria mitochondria 3 0.01
plastid plastid 292 0.99

clusters connected through mates:

Cluster Number of shared
read pairs		 k
137 9 0.327
174 7 0.35
156 1 0.0526
303 1 0.0571
1900 1 0.0606
4370 1 0.0667