Cluster no. 108

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Cluster is part of supercluster: 53

Cluster characteristics:

size 304
size_real 304
ecount 1961
supercluster 53
annotations_summary 100.00% organelle/plastid
pair_completeness 0.80952380952381
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00328947368421053
satellite_probability 2.15940292115794e-23
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S8 94
S9 105
S7 105
comparative analysis - number of edges between species:
S8 S9 S7
S8 215 216 188
S9 216 244 238
S7 188 238 217
comparative analysis - observed/expected number of edges between species
S8 S9 S7
S8 1.100 0.980 0.927
S9 0.980 0.982 1.040
S7 0.927 1.040 1.030

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
plastid plastid 304 1

clusters connected through mates:

Cluster Number of shared
read pairs		 k
137 7 0.233
181 5 0.182
21 1 0.0015
38 1 0.00114
275 1 0.0444
556 1 0.0465
1120 1 0.0513
4480 1 0.0571
24600 1 0.0588